Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04210 ATGGCAACAAAAATAGACGCAACACCACAGCCACAACCACCACCACCTCCCTTCAAGCTCAACATGACACCCTGTGAAGTTGTCCACCACTTGGCTTCATCCAATGCGGTGGTGATCTTCAGCTTGAGCGACTGCTGCATGTCCACAGTGGCCAAGCGCTTCCTCATCAGCCTCGGCGTGGGACCAACTATTGTGGAGCTTGACAAGGAGTCTGATGGAAATGCTATCCGGTCTTTCTTGAATCAAATTTCTGGGGCTGAGCAGCCTGTTCCGGCTGTCTTCGTCGGCGGTAAGTTTGTTGGTGGTGTGCAGACTCTCATGGCCAAACACATCAATGGAACTCTTGTCCCTCTTCTTAAGGAAGTTGGTGCTCTCTGGCTCTAA 384 0.5156 MATKIDATPQPQPPPPPFKLNMTPCEVVHHLASSNAVVIFSLSDCCMSTVAKRFLISLGVGPTIVELDKESDGNAIRSFLNQISGAEQPVPAVFVGGKFVGGVQTLMAKHINGTLVPLLKEVGALWL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04210 127 PANTHER GLUTAREDOXIN 27 127 IPR011905 -
Vifa1g04210 127 Pfam Glutaredoxin 37 100 IPR002109 -
Vifa1g04210 127 Gene3D Glutaredoxin 24 126 - -
Vifa1g04210 127 NCBIfam glutaredoxin-like family 28 127 IPR011905 -
Vifa1g04210 127 ProSiteProfiles Glutaredoxin domain profile. 25 126 - -
Vifa1g04210 127 SUPERFAMILY Thioredoxin-like 26 126 IPR036249 -
Vifa1g04210 127 CDD GRX_GRXh_1_2_like 36 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04210 Vifa-Chr1 650214480 650214863 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g04210 26 127 Miscellaneous Gene Families AT4G15670 46.078 1.20e-27 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04210 K03676 - gmx:100775537 164.466