Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04028 ATGGGAAAAGAGGTAAAGAGGTTTCTACTGAAAACGGAACCATCAGAGTGGTCGTGGGAGGATCAAGCCGCCAACGGCGGGATAAGCAAATGGGACGGCGTTAAAAACAAACAAGCTCAGAAATACCTGAAATCAATGTCAATCAACGATGTCTGCTTCTTCTACCACTCCGGTACCAAGGCTCGTCGAATCGTCGGCGTTGTTACCGTCGTCAAGGAATGGTACACCGACGAAGAAAACGACGGTGGTGCGGTGGACGTGAAAGCTGTCGGCGAAATGAGAAGAGCGGTTGATTTGAAAGAGATGAAAGATTTGAAGGATTTTGTACTGTTGAAGCAGCCTAGGCTTTCTGTTGTTCCAGTTCCTGACCTAATTTGGGATAGAATTTGTGAATTGGGTGGCGGTTATTATGGTGATGGGAATGATGATGAATCAAACCCTAACGATTGA 450 0.4622 MGKEVKRFLLKTEPSEWSWEDQAANGGISKWDGVKNKQAQKYLKSMSINDVCFFYHSGTKARRIVGVVTVVKEWYTDEENDGGAVDVKAVGEMRRAVDLKEMKDLKDFVLLKQPRLSVVPVPDLIWDRICELGGGYYGDGNDDESNPND 149
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04028 149 CDD EVE 8 132 IPR047197 -
Vifa1g04028 149 PANTHER THYMOCYTE NUCLEAR PROTEIN 1 3 145 - -
Vifa1g04028 149 Gene3D ph1033 like domains 5 144 - -
Vifa1g04028 149 Pfam EVE domain 7 132 IPR002740 -
Vifa1g04028 149 SUPERFAMILY PUA domain-like 5 134 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04028 Vifa-Chr1 618499104 618499553 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04028 - - psat:127076846 280.026
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04028 1 618499104 618499553 Vifa1g04028 1 618499104 618499553 ECH