Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04022 ATGGAATCTGTTCTAAGCCAAGTTGGTGTAGTATTTTGCCAAAAGCCACGTTTTGGTGAGACCAAAAATGGATTCTTAGGCACCAATTTCAACAACACTTGTTCCTTTGGTAGGAGAGTTAGGAGTGTGGTGGTGGTGAAAGCGGAAGCTGGGGGTGTGAGTAGTATAAATCCAGATGTGAGGAAGAATGAAGAAAAAGTTGTTGATTCTGTTGTGCTTAATGAAGTCTCTAAGCCTGTTACCGCTTATTGCAGATGTTGGAGATCAGGAACTTTTCCTCTATGTGATGGAAGCCATGTAAAGCACAACAAAGCAACTGGAGATAATGTTGGGCCTCTTCTTCTGAAAAAATAA 354 0.4124 MESVLSQVGVVFCQKPRFGETKNGFLGTNFNNTCSFGRRVRSVVVVKAEAGGVSSINPDVRKNEEKVVDSVVLNEVSKPVTAYCRCWRSGTFPLCDGSHVKHNKATGDNVGPLLLKK 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04022 117 SMART znf_cdgsh 66 105 IPR018967 GO:0043231|GO:0051537
Vifa1g04022 117 FunFam CDGSH iron-sulfur domain-containing protein 1 72 117 - -
Vifa1g04022 117 Gene3D - 72 117 IPR042216 -
Vifa1g04022 117 Pfam Iron-binding zinc finger CDGSH type 71 99 IPR018967 GO:0043231|GO:0051537
Vifa1g04022 117 PANTHER CDGSH IRON-SULFUR DOMAIN-CONTAINING PROTEIN 1 43 117 IPR045131 GO:0010506|GO:0051537
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04022 K23882 - ccaj:109804042 160.999
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04022 1 617955963 617957266 Vifa1g04022 1 617955963 617957266 ECH