Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g04019 ATGGATCCGTGCTCCTTCGTACGGATCCTCGTCGGAAACCTAGCTATCAAATCTCCGGCATCCTCAAACCCATCTTTCTCCGGTAAAGTTCACCCTTCCAGCTCTCCATGCTACTGCAAAATCAAACTCAGAGGCGTCGATTCACCACCGTGCCACGTGGCTACCGTTCCTCTAATATCGGAATCGGAAACTCACCCTCACTCTCTCGCCGCTAGCTTCGATTTCCCCAAATCGCAACTCTCCAATATTAAAAACCCGTCCATCAAAATCTCCGTTTACAAGACACGAACAGATCCTTCATGCGTTTTCAATTCCTCTAAATTGTTAGGTCAAATTTCAATTCCACTCGATCTTACCTTATCGGAATCACGACATTGTTCTTTTCATAACGGTTGGATTGCTCTAACCAAAAGCAACCGCAAAAAAACCGATTCTCAAACTCAGCCTCAGTTATTGCATTTAACTATCCGGTCCGAACCAGATCCGAGATTCATTTTCCGGTTCGATGGTGAACCAGAGTGTAGTCCACAGGTTTTCCAAGTCAAGGGAGAGGTCAAACAACCGGTTTTCACTTGCAAGTTCAGTTTCAGAGATAGGAACCCGGTTCAGTTTCCTGCTGCTAATCAATATCATCCTTTGGTAGCGGACCGAAAAGGATGGTCTATTACGATACACGATTTATCCGGTTCACCGGTTGCGTGTGCATCGATGGTTACTCCGTTTGTTCCTTCACCCGGTTCACAACGGGTCAGTAAATCCAACCCGGGAGCTTGGCTTATTATTCGACCCGATGGTGATGGCACATGGAAGCCATGGGGTCGGCTCGAGGCTTGGCGTGAGCCAGGTAACTCAAACGGAGTCGGTTACCGTTTCGATGTTCTTCCGGCCACCGCGGATCCTGTTACACTCGCCGCGTGTACTATTAACTCACAGCACGGAGGTAAATTCACTATTGATGTTACTCCCGGTGTTACTCCGGCGAGTACTCCACACGGAAGCTGGGATCTCGGGTCAGGAACAAGTTCAAGACCTGGATCTGGATCCGGTTCGGATTTCTCAGTAGAGAATCAGTTTTTCTACAGAGGGTTTGTCATGTCGGCGAGGTTTGACGGTGAAAAAAAGTGTAGTAAACCGGAGGTGGAGGTTGGTGTGAAGCACGTGACTTGTGCGGAGGATGCTGCGGCGTTTGTTGCACTTGCAGCTGCCATGGATTTGAGCATGGATGCGTGCAAATCATTCTCTCAGAAACTCCGAAAAGAGTTGCGGCAGTAG 1272 0.4858 MDPCSFVRILVGNLAIKSPASSNPSFSGKVHPSSSPCYCKIKLRGVDSPPCHVATVPLISESETHPHSLAASFDFPKSQLSNIKNPSIKISVYKTRTDPSCVFNSSKLLGQISIPLDLTLSESRHCSFHNGWIALTKSNRKKTDSQTQPQLLHLTIRSEPDPRFIFRFDGEPECSPQVFQVKGEVKQPVFTCKFSFRDRNPVQFPAANQYHPLVADRKGWSITIHDLSGSPVACASMVTPFVPSPGSQRVSKSNPGAWLIIRPDGDGTWKPWGRLEAWREPGNSNGVGYRFDVLPATADPVTLAACTINSQHGGKFTIDVTPGVTPASTPHGSWDLGSGTSSRPGSGSGSDFSVENQFFYRGFVMSARFDGEKKCSKPEVEVGVKHVTCAEDAAAFVALAAAMDLSMDACKSFSQKLRKELRQ 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g04019 423 PANTHER OS08G0163500 PROTEIN 1 423 IPR010410 -
Vifa1g04019 423 Pfam Protein of unknown function (DUF1005) 1 422 IPR010410 -
Vifa1g04019 423 MobiDBLite consensus disorder prediction 322 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g04019 Vifa-Chr1 617408798 617410069 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g04019 - - gmx:100816033 614.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g04019 1 617408798 617410069 Vifa1g04019 1 617408798 617410069 ECH