Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03952 ATGTCCCAAAACGATTCCCAAACCCATCACCACAACAACAATGTCGAAACCAAAACCACCCTCCAAACACCACCACTTTCCTCAAAACCCCACCCAATTTTGACCCTCCAATTAAAAGAATCACAAGACTCAATTTTTCCATCAAATTCAAACACCCTTTTTGCCAAAACAATGACTTCAACAAACTCCACTTCCACAGAACCACTTCCTTCCTCCGATGACATCGCCGCCAAAGCCGTTAACAAACGCTACGAGGGTCTCGTCACTGTCCGAACCAAAGCTATCAAAGGTAAAGGTGCATGGTATTGGACTCATCTCGAGCCGATTCTGGTTCGAAATCCTGATTCGGGTCTTCCTAAATCGGTTAAACTCAAGTGTTCTTTGTGTGAAGCTGTTTTCTCTGCTTCAAACCCTTCCAGAACAGCTTCTGAGCATTTAAAGCGTGGAACTTGTTCCAATTTCAACAACTCCGGCTTGAAACAACAACATCAACAACAACAACAACAACAACAACCCGGTTCAGTTCCTTCTCCGGTTCCTATTTCGTCGGTTTCCGGTTCAAACCGGAAAAGGGGTTCACCACATCAAATGGGTGTTTCTGTTTCAACCTCACCAACATCGTTAACTTATCAAAATCATAACTTGGCATTGGTTGAAATCGGGTATCCTCAGGTGCATGGTAGTATGGTGAACCATCAGAATCAGAATCAGAGTCTGACTCAGAATCATTTGATGTTATCTGGTGGAAAAGAAGATTTATGTGCTTTGGCTATGTTTGAAGACAGTGTGAAGAAGTTGAAGAGTCCTAAGACTTCACCTGGTGCTTCATTGAGTAAAGAACAGGTTGGTTTGCCTGTAGGAAGTTGTTTGAGGCGCGAGGTTTCTGGTCCGAGGCTCGACGCCAGGTTTAGCGAGGTTAAGAGTGAGTCCGAGGCAAAAATTAGGGATGCAATGTTTTTTCAAGTAGCTAGTGATGGTTGGAAAAGTAATAATAGTAGTAGTAGTAGTAATAGGAATTTGTATGGTTTGTGTTGTGGTAGTGAGAGTTTGGTTAAGTTTATGGTGAATTTACCGAATGGGAATAGCGTTTTTCAAAAGGCGGTGTTTACGGGCGGTGGTGGAGTTGTGAATTCGAAGTATGCTGAAGAGGTTTTGTGGGAGACGGTGACCGGTGTTAGCGGTAGTGTTGTTCAGAGATGTGTAGGGATTGTTGCTGATAAGTTTAAGGGTAAGGCATTGAAGAATTTGGAGATTCAAAACCATTGGATGGTGAATACTTCTTGTCAGCTTCAAGGGTTTGTTAGTTTAATCAAGGATTTCAACAACGAGCTCGAACTTTTCGGTGTTGTTACGAAGAATTGTCTCAAAGTTGCAGATTTTATAGATGGCGAGTCTCAGGTAAGGAATGTTTTTGTTAATTATAGAATGCAGGAGATGGAGTACGGCGGGTTGATTCGTGTTCCTTCACTAAAATGTGATCCGTCGAAGAATTTTTCATCCGTGTTTCCAATGCTCGAGGATATTTTGAGCTGTGCTAGAGTGATCCAAATGGTTGTGATGGAGGACGGGTTTAAGGCGATGTTTATGGAGGATCCGCAAGCAAGAGAAGTGGCTGGTTTGGTTCAGAGTGAGGTGTTTTGGAACGAGCTCGAAGCGGTTTATTCCCTCGTGAAGATTATTAAAGGAATGGTTCATGATATAGAGACGGAGAGGCCGTTGATTGGTCGGTGTTTGCCTCTTTGGGAGGAGCTAAGAACCAAAGTTAAGGAGTGGTGTCGAAAGTACAATGTCGTCGAAGGACTAGTGGAGAAAATACTTGAAAAACGGTTTCGAAAAAACTACCACCCTGCATGGTCAGCAGCGTTTATACTTGATCCACTTTACTTGATCAAAGACACAAGTGGAAAGTATCTTCCACCGTTCAAGTTTTTGACGCGTGAACAAGAGAAAGACGTTGATAAGTTACTCACGAGACTAGTGTCACGAGAAGAAGCTCATGTGGTATTAATGGAGCTAATGAAATGGAGGTCAGAAGGACTTGACCCTCTTTACGCACAGGCGGTTCAGATGAAACAAAGAGACCCTGTAACCGGGAAGATGAAAGTTGCGAATCCACTTAGCAGTCGACTCGTTTGGGAAACATGTCTCTGCGAGTTTAAATCTCTAGGGAAGATCGCAGTGAGGCTCATTTTTCTCCATGCAACTTCATGCGGATTCAAGAGTAACTGGTCTTTCATGAGGAAAGTTTCTTCTGCAAACAAAAACTCTAGAGTCGCATTGGAGCGAGCTCAGAAAATGATATATATTGCAGCTCATGCAAAGCTTGAAAAGCGAGACTTTATAAGCGAGGAAGAAAAAGACGCAGAATTGTTCGCCATTTCCGGAAGTGACGAAGATAGCATGCTAGCTGAGGTATATGCTGATGCAATGCAACCTTAG 2439 0.4309 MSQNDSQTHHHNNNVETKTTLQTPPLSSKPHPILTLQLKESQDSIFPSNSNTLFAKTMTSTNSTSTEPLPSSDDIAAKAVNKRYEGLVTVRTKAIKGKGAWYWTHLEPILVRNPDSGLPKSVKLKCSLCEAVFSASNPSRTASEHLKRGTCSNFNNSGLKQQHQQQQQQQQPGSVPSPVPISSVSGSNRKRGSPHQMGVSVSTSPTSLTYQNHNLALVEIGYPQVHGSMVNHQNQNQSLTQNHLMLSGGKEDLCALAMFEDSVKKLKSPKTSPGASLSKEQVGLPVGSCLRREVSGPRLDARFSEVKSESEAKIRDAMFFQVASDGWKSNNSSSSSNRNLYGLCCGSESLVKFMVNLPNGNSVFQKAVFTGGGGVVNSKYAEEVLWETVTGVSGSVVQRCVGIVADKFKGKALKNLEIQNHWMVNTSCQLQGFVSLIKDFNNELELFGVVTKNCLKVADFIDGESQVRNVFVNYRMQEMEYGGLIRVPSLKCDPSKNFSSVFPMLEDILSCARVIQMVVMEDGFKAMFMEDPQAREVAGLVQSEVFWNELEAVYSLVKIIKGMVHDIETERPLIGRCLPLWEELRTKVKEWCRKYNVVEGLVEKILEKRFRKNYHPAWSAAFILDPLYLIKDTSGKYLPPFKFLTREQEKDVDKLLTRLVSREEAHVVLMELMKWRSEGLDPLYAQAVQMKQRDPVTGKMKVANPLSSRLVWETCLCEFKSLGKIAVRLIFLHATSCGFKSNWSFMRKVSSANKNSRVALERAQKMIYIAAHAKLEKRDFISEEEKDAELFAISGSDEDSMLAEVYADAMQP 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03952 812 PANTHER OSJNBA0013A04.12 PROTEIN 80 776 - -
Vifa1g03952 812 MobiDBLite consensus disorder prediction 138 205 - -
Vifa1g03952 812 MobiDBLite consensus disorder prediction 1 31 - -
Vifa1g03952 812 SUPERFAMILY Ribonuclease H-like 399 771 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03952 Vifa-Chr1 607042940 607045483 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03952 - - psat:127131004 1492.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03952 1 607042940 607045483 Vifa1g03952 1 607042940 607045483 ECH