Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03947 ATGGGGAATACGTTCTGTTTATTCTGTGGCTGCGTCGAACAGTCTAGCGTCGGTGTTGTTGAACAGTGGGGTCGTTTTCACCGATTGGCTCAACCTGGTTTCCAGTTCTTCAACCCTCTCGCCGGTGAATGTCTCGCCGGTATTCTCTCCACTCGTATCGCCTCCCTCGACGTCAAAATCGAAACCAAAACCAAGGATAATGTTTTTGTGCAGTTGTTGTGTTCGATTCAATACCGTGTCGTTAAGGAAAATGCTGATGATGCTTTTTATGAGTTGCAAAACCCTCAGGAACAGATCCAGGCTTATGTTTTTGATGTGGCCCGTGCTATTGTTCCTAAGATGAATTTGGATGAGCTGTTTGAGCAAAAAGGTGAGGTTACCAGATGTGTGTTGGAGGAACTTGAAAAGGTGATGGGAGAATACGGATATAGCATAGAGCACATACTGATGGTTGATATTATACCAGATCCTGCTGTGCGGAGGGCAATGAATGAGATTAATGCAGCTCAAAGGATGCTACGTGCTAGTGAATTCAAAGGCGAAGCTGATAAGGTCCTTATAGTTAAAAAGGCAGAAGCAGAAGCTGAATCAAAGTACTTAGGCGGAGTTGGTGTGGCAAGACAGCGACAGGCTATCACGGATGGGTTGAGAGAGAACATCTTGCAATTCTCTACCAAAGTAGAAGGAACTTCGGCAAAGGAAGTGATGGATCTTATCATGATTACTCAGTACTTTGACACAATCAGAGACCTCGGGAACTCTTCAAAGAATACCACAGTTTTTATACCTCATGGACCTGGACATGTTAGGGATATCTCTAATCAAATACGCAATGGAATGATGGAAGCATCATGTGCTCAAGTAACTGATAGTGAGTAA 879 0.4391 MGNTFCLFCGCVEQSSVGVVEQWGRFHRLAQPGFQFFNPLAGECLAGILSTRIASLDVKIETKTKDNVFVQLLCSIQYRVVKENADDAFYELQNPQEQIQAYVFDVARAIVPKMNLDELFEQKGEVTRCVLEELEKVMGEYGYSIEHILMVDIIPDPAVRRAMNEINAAQRMLRASEFKGEADKVLIVKKAEAEAESKYLGGVGVARQRQAITDGLRENILQFSTKVEGTSAKEVMDLIMITQYFDTIRDLGNSSKNTTVFIPHGPGHVRDISNQIRNGMMEASCAQVTDSE 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03947 292 CDD SPFH_like_u4 11 280 - -
Vifa1g03947 292 Gene3D Band 7 domain 46 169 IPR036013 -
Vifa1g03947 292 Pfam SPFH domain / Band 7 family 12 179 IPR001107 -
Vifa1g03947 292 PANTHER STOMATIN-LIKE PROTEIN 2, MITOCHONDRIAL 6 286 - -
Vifa1g03947 292 SUPERFAMILY Band 7/SPFH domain 48 172 IPR036013 -
Vifa1g03947 292 SMART PHB_4 7 167 IPR001107 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03947 Vifa-Chr1 605405866 605408351 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03947 - - gmx:100804986 526.168
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03947 1 605405866 605408351 Vifa1g03947 1 605405866 605408351 ECH