Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03768 ATGTATTTCTCAGAAGTGAATCCAAGAAAAAGTAAGATGGGATTGAGGGAAAATATATTGGTGTTTGTTTTGATTGTGATGTTGTTGAAAGTAACAGAAGGGATTAGATTTGTGATAGATAGAGATGAGTGTTTCTCACATGAGGTTAAGTACGAGGGTGACACTGTTCATGTTTCTTTCGTTGTTATTAAGGCTGATTCTCCTTGGCATTACGGTGATGAAGGTGTCGATCTTGTGGTAAAGGGACCTGTTGGTGATCAAATTCAAGATTTCCGTGACAAGACCAGTGAAAAGTTTGAGTTTGTGGCTCACAAATCGGGGGTGCATAAGTTCTGCTTCACTAACAAATCTCCTTATCACGAGACCATCGATTTTGATGTGCATGTTGGTCACTTCTCTTACTTCGAGCAACACGCAAAAGACGAGCATTTCAACCCTTTGTTAGAGCAGATAGCTAAATTGGAAGAAGCTCTTTACAATATTCAGTTCGAACAACATTGGTTAGAAGCTCAGACCGATCGCCAAGCAATAGTGAATGATGGCATGAGCCGAAGAGCAGTACACAAGGCAATCTTTGAATCAGCAGCACTGATTGGAGCTAGTGCACTACAAGTCTTTCTTCTGCGACGTTTATTTGAGCGAAAGTTGGGAAACTCTAGAGTTTAG 666 0.4069 MYFSEVNPRKSKMGLRENILVFVLIVMLLKVTEGIRFVIDRDECFSHEVKYEGDTVHVSFVVIKADSPWHYGDEGVDLVVKGPVGDQIQDFRDKTSEKFEFVAHKSGVHKFCFTNKSPYHETIDFDVHVGHFSYFEQHAKDEHFNPLLEQIAKLEEALYNIQFEQHWLEAQTDRQAIVNDGMSRRAVHKAIFESAALIGASALQVFLLRRLFERKLGNSRV 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03768 221 Pfam emp24/gp25L/p24 family/GOLD 42 213 IPR009038 -
Vifa1g03768 221 ProSiteProfiles GOLD domain profile. 42 129 IPR009038 -
Vifa1g03768 221 PANTHER TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN 20 216 IPR015720 -
Vifa1g03768 221 SMART EMP24_GP25L_2 34 213 IPR009038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03768 Vifa-Chr1 582125032 582128085 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03768 - - gmx:100527418 378.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03768 1 582125032 582128085 Vifa1g03768 1 582125032 582128085 ECH