Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03679 ATGGCACTGGCTAATGCTGCGGTGGTCGGTCCTTCTCTCTACGGCGTTTCTCGAATCGCGAAGGCTCCGTTTCTAGGCTCTCACGGTGATGTTGGTTCTGGATTTTGTGGTTCTTCGTTTTGCATCGGGTCACACGCTGGGAAAAGTGATGTTATTATTGAAAGGAGGAAGTTGAAGTATGTTGAAAATAATAACAATAACAACCGGATTGTTGAAAATCCGCTGTTGAAATCCAGTGTTGAAATCCCAGTTTCTTGCTATCAGCTTATTGGTGTTCCTGATCGAGCTGAGAAAGATGAAATTGTTAAGGCAGTTATGAGTTTAAAAAATGCAGAAATTGACGAAGGCTACACAATGGGTGTTGTTGTATCTCGCCAGGATCTTCTGATGGATGTTAGGGATAAGCTCCTTTTTGAGCCAGAATATGCTGGTAACCTGAAGGAAAAGATCCCCCCTAAATCTTCCCTTCGTATTCCTTGGTCTTGGTTGCCTGGTGCTCTATGCCTTCTTCAAGAGATTGGAGAATCAAAGTTTGTGCTGGACATAGGAAGAACGAGTCTTCAGCATCAAGATGCAAAGCCGTATGCAGATGATTTAATTCTTTCTATGGCACTAGCTGAGTGTACAGTTGCGAAGATTGGCTTTGAGAAGAAAAAAGTATCTCAAGGTTTCGAAGCTCTTGCCCATGCTCAGTGTCTTCTAAGAAGTAAACCATCTCTTGCAAAAATGACACTCCTATCTCAGATCGAAGAATCACTTGAAGAGCTTGCACCTGCTTGCACCTTGGAGCTACTGAGCATGCCAAATACCCCTGAAAATGTTGAGCGAAGACGAGGAGCAATTGCAGCTTTGCGTGAAATGATTAGACAGGGTCTTGATGTTGAAGCCTCGTGCCAAGTACAGGACTGGCCTTCTTTCCTAAGCCAAGCTTTTGGCAATTTACTGGCTAGTGAGATAGTTGATCTTCTTCCTTGGGATAGCTTAGCTGTGATGCGAAAGAATAAAAGGACAATTGAATCACAGAATCTAAGGGCAGTAATTGATTCAAACTGTTTCTATAGAGTTTTTACAGCCCATATGGCACTTGGGTTTTCCAGCAGGCAAAAAGAGTTGATTAACAAAGCAAACAGCATATGTGAATGTCTGATAGCTTCAGAGGGCATTGATCTGAAATTTGAAGAAGCTTTTTGCCTATTCCTTCTTGGACTGGGCACAGAGGCTGAGGCAGTTGAAAAGCTGAAGCAGCTTGAGCTGAACTCCAATCCAAAACATAATTCAGTCTTGGGGAAGGCAATAATGGATGCTTCAGCTGCAAACCCATCACTGGAATTGTGGCTGAAGGATTCTGTACTTGATTTGTATCCAGATACGAAAGGTTGTTCTCCATCTTTGGCCAATTTCTTTAATACTCAAAAGAAAATTTCTGGAAGCAAGAATTCTAAAGGATCTCCACAAATATTTCCTACTATATGTCATAGACCTCTATCCTCATATGGTTCTGTAGAACGAAAAGATTTTGAGGAACCTCACCCATATACGAGCTCTTCCCCGTATTTGGGGCTTGCTGTCAAGCAGCTGACTCCTACTGATTTGCAGAGTTCACTGCTATCCGGAAAAAATGAAAACAGACCCGATCCTAGTGAGCCACCTGTTAAAGTGAACAGGAACCTTGGCACTCATCACAGGGGAGTTTGGGATAATCACTTCTTTTGTGCTCAAGTATTTGAAAGAATAACATACGTTACTGTATTGGGCTGTGTTGCATTTGCATCTACGAAGTTGTTCGGAATGAACCCGGGCAAGAGTGTCACTGGTTCTAACTGGGCTTTCACAAAAGCAAATAATTGCACTTCTTGGGCTGCAAATTCATCTGCTAACTATGCTATTGGTCCTACAAACATTAGGCAGAGTTCTATTGCCAACAAACTGAAGAGAATCATGTCAACGGTTAAGATACAGTTTTTGCGCCAGCAAGATGCTGGAAGTCGAAGTGATTTACACAGTGCTCTTACCTCATCATCCTCCCCTATTAATGTGTATAGGAGGTTAATGCCTGTGGAAGAAGCAGAAACCCTTATTAGGGAATGGCAAACAATCAAAGCTGAAGCTTTGGGGCCTAGCCATGAAGTAAATGGTCTAGCTCAAGTCCTTGACGAATCTATGCTTGCGCAGTGGCAAGCCTTGGCCGATGCTGCAAAAGAAAAATCTTGTTACTGGAGATTTCTTTTGCTAAAATTGTCTGTCCTTAGAGCTGACATTCTATCAGATGGAAATGGATCAGACATAGCCGAAATAGAAGCCCTTTTAGAGGAAGCCGCCGAACTAATTGACAGTTCTCAGCAAAAGAACCCAAACTACTATAGCACTTACAAAGTTAAATATATTGTGAAGATGCAAGAGGATGGGTCATGGAAGTTCTGTGAAGCCGATATTCGAACACGATGA 2445 0.4245 MALANAAVVGPSLYGVSRIAKAPFLGSHGDVGSGFCGSSFCIGSHAGKSDVIIERRKLKYVENNNNNNRIVENPLLKSSVEIPVSCYQLIGVPDRAEKDEIVKAVMSLKNAEIDEGYTMGVVVSRQDLLMDVRDKLLFEPEYAGNLKEKIPPKSSLRIPWSWLPGALCLLQEIGESKFVLDIGRTSLQHQDAKPYADDLILSMALAECTVAKIGFEKKKVSQGFEALAHAQCLLRSKPSLAKMTLLSQIEESLEELAPACTLELLSMPNTPENVERRRGAIAALREMIRQGLDVEASCQVQDWPSFLSQAFGNLLASEIVDLLPWDSLAVMRKNKRTIESQNLRAVIDSNCFYRVFTAHMALGFSSRQKELINKANSICECLIASEGIDLKFEEAFCLFLLGLGTEAEAVEKLKQLELNSNPKHNSVLGKAIMDASAANPSLELWLKDSVLDLYPDTKGCSPSLANFFNTQKKISGSKNSKGSPQIFPTICHRPLSSYGSVERKDFEEPHPYTSSSPYLGLAVKQLTPTDLQSSLLSGKNENRPDPSEPPVKVNRNLGTHHRGVWDNHFFCAQVFERITYVTVLGCVAFASTKLFGMNPGKSVTGSNWAFTKANNCTSWAANSSANYAIGPTNIRQSSIANKLKRIMSTVKIQFLRQQDAGSRSDLHSALTSSSSPINVYRRLMPVEEAETLIREWQTIKAEALGPSHEVNGLAQVLDESMLAQWQALADAAKEKSCYWRFLLLKLSVLRADILSDGNGSDIAEIEALLEEAAELIDSSQQKNPNYYSTYKVKYIVKMQEDGSWKFCEADIRTR 814
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03679 814 MobiDBLite consensus disorder prediction 534 555 - -
Vifa1g03679 814 Pfam ARC6-like, IMS domain 689 806 IPR025344 -
Vifa1g03679 814 Coils Coil 762 782 - -
Vifa1g03679 814 PANTHER PLASTID DIVISION PROTEIN CDP1, CHLOROPLASTIC-RELATED 55 812 IPR044685 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03679 - - gmx:100818147 1201.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03679 1 568422765 568433862 Vifa1g03679 1 568422765 568433862 ECH