Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03652 ATGAGACCAGTTTGGGCTGTGAAAGCTCTAATCGTCATCGTATTCACTTCGATTCTCTTCTTCCGTTGCGTTTGTGGTGCTAACCACACCGTCGGTGGCGCTTCCGGCTGGGATCTCAATGCTAATATGCACGACTGGTCTTCAACCACTACCTTCAATGTCGGCGATGATCTCGTGTTCTCTTACACGCCGTTACACGATGTGGTGGAAGTGAACCAACGAGGTTACGACACGTGTACAATAGCAAACGCAATAGCCACGTATAACACCGGAGAAACAGTGATCCATCTCTTCTCAGAAGGAACCCGTTACTTCGTCTGTGGGAGATTGGGCCATTGCCAAATGGGCCTCAAACTCGAAGTCCAAATTCCGATCCAATCCAACAACAACGGAACCGGTGATAATCAAAACCAACCCGGCGGCGCTCGGAGAAATCCACCTCCACCTCCACCTCCACCTCGTTCTCCACTTCGTTTTCCTCAGCGTAATCCTCCGCCACCACCTCATCAGTCTTCTCCTGGTCCTTCAGATGCACCTGCTGAAGAGCCTTGTGATTGTTCCTCTGCATGGGAGGGTTGTTGGGTCGTGCCACTGATCACACGCGTGATCGTCTTAGGTTTAATCTTCTTCTCTTCTTTGTTCTTTGTTCATTAG 654 0.5015 MRPVWAVKALIVIVFTSILFFRCVCGANHTVGGASGWDLNANMHDWSSTTTFNVGDDLVFSYTPLHDVVEVNQRGYDTCTIANAIATYNTGETVIHLFSEGTRYFVCGRLGHCQMGLKLEVQIPIQSNNNGTGDNQNQPGGARRNPPPPPPPPRSPLRFPQRNPPPPPHQSSPGPSDAPAEEPCDCSSAWEGCWVVPLITRVIVLGLIFFSSLFFVH 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03652 217 FunFam Blue copper 25 129 - -
Vifa1g03652 217 MobiDBLite consensus disorder prediction 142 174 - -
Vifa1g03652 217 Gene3D - 26 128 IPR008972 -
Vifa1g03652 217 SUPERFAMILY Cupredoxins 26 123 IPR008972 -
Vifa1g03652 217 Pfam Plastocyanin-like domain 37 116 IPR003245 GO:0009055
Vifa1g03652 217 PANTHER BLUE COPPER PROTEIN 27 132 IPR039391 GO:0009055
Vifa1g03652 217 ProSiteProfiles Phytocyanin domain profile. 27 125 IPR003245 GO:0009055
Vifa1g03652 217 MobiDBLite consensus disorder prediction 125 183 - -
Vifa1g03652 217 CDD Phytocyanin 27 123 - -
Vifa1g03652 217 MobiDBLite consensus disorder prediction 125 141 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03652 Vifa-Chr1 563719213 563720264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03652 10 123 Miscellaneous Gene Families AT3G27200 37.391 2.39e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03652 - - gmx:102664120 250.366
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03652 1 563719213 563720264 Vifa1g03652 1 563719213 563720264 ECH