Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03642 ATGGTAAGGGGGCCCAATAATACTATGGTGGATATGAACAAAGAGAAAGTGGTTTTGAATTCTCAGTTGTTTTCTTCATCTCTAAAAGGGTTTAAGGACAAGACTATCACCAACAATAACATGCCCTCCTGGCTTCTCACCAGCATTTCTGATTTGGAAGAGAGGGTGAAAATGTTGGCAATAGGAACATGTGAAGATGAAGAAGAAGGAGACACTTTTGCTGAAAGAGCTGAAACTTACTACCAGAAGAGACCTCAACTACTTTCACTTCTTCATGATTTGTACAATGGCTATATAACTTTATCCGATCGTTATATACAAACACTTGCGAAACATAAGCATCATAGCAGACACTCTTCCCAAGTTTCAACTTTGGAAGAAGGTTTCTATGATCAAGAAGAGGAAGAAGTTATTAGTGGTGTGACTCAAGTTGATTCGGATATGGAAAGTTCGATCTCTTATCAACAAACATTGTCGTTGAGGAGTCTTCCTAATAGGGGAGCAACTATGTTTGATGTTGACGTGGTTGTAGCTGAGCTTGTGATGAAGAATGTTGAGTGTGATTTTCTGTTGCACGAGGTTAATGCGATGGAGAGGAGGTATTGTGAGTCGTCGAGGAAAAGTGAGTTACAAAAGAGTTTGCTTGAGGTTTTGGAATCTGAGAGAGTTGTTTTGCTGAATGAGAATGCTGGTTTGAGCTATAGGGTTAATACATTGGTTGAAGAGAACAAAGAGCTTGCTTCGGAATCTGTTTTTATCAAACGGAAAGCTGGGGAGTTAGCCAAGTGTGTGTTGAAGATGAGGGAGGATCATAGAGTCTATCTATTGCATAGGAAAATTGAAGATCTTCAAGGACAGGTACATGGTTTGGAGAAGAGGAACAAGGAGTATTATGAGAGGCTTTTGAGAAGAGAGAGTCAAGAAAATGAAAACAAAGGGAAGAATGGTGGTGAAGGAATAGAAGCTTTGAGAAGGTTAAAGTGGAAAGAAGAGGAAAAGTCTTGTAAGAAGAATTTGGATGGAAAGAAAGGTCATAGTTTGTGGAAAAAGCTCAAGAACATGGACTTGTTGTTGTGTGGGACAAGTCCAGCTTGTTCTTGA 1101 0.396 MVRGPNNTMVDMNKEKVVLNSQLFSSSLKGFKDKTITNNNMPSWLLTSISDLEERVKMLAIGTCEDEEEGDTFAERAETYYQKRPQLLSLLHDLYNGYITLSDRYIQTLAKHKHHSRHSSQVSTLEEGFYDQEEEEVISGVTQVDSDMESSISYQQTLSLRSLPNRGATMFDVDVVVAELVMKNVECDFLLHEVNAMERRYCESSRKSELQKSLLEVLESERVVLLNENAGLSYRVNTLVEENKELASESVFIKRKAGELAKCVLKMREDHRVYLLHRKIEDLQGQVHGLEKRNKEYYERLLRRESQENENKGKNGGEGIEALRRLKWKEEEKSCKKNLDGKKGHSLWKKLKNMDLLLCGTSPACS 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03642 366 Coils Coil 280 300 - -
Vifa1g03642 366 ProSiteProfiles Networked (NET) actin-binding (NAB) domain profile. 24 112 IPR011684 GO:0003779
Vifa1g03642 366 PANTHER PROTEIN NETWORKED 4A 21 121 - -
Vifa1g03642 366 Pfam KIP1-like protein 40 105 IPR011684 GO:0003779
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03642 Vifa-Chr1 561890170 561893086 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03642 - - gsj:114389453 488.804
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03642 1 561890170 561893086 Vifa1g03642 1 561890170 561893086 ECH