Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03639 ATGTTTGGTAGAGGAGCAATTGGATCAATCTTGAAGCGCAGCAAAGAAGCGTGTTTGATTCAGAAGCTCACAGGGAGAAGCAAAACGACGGCGTTTCGTTCCTCTCATCCATCATCTATCGCCGAACAACAATCGTTCAAGTTTTGTAATCCTCCCGTTTCCGCACATTTCTTTCGAACTTTCCGATCCCATCTTGTTCCTAAGGGTCATCATGTGCCATTCACGAGGAACTTTTCTAAGACGGTGTCTGCTGCGGCTGGACATAAGGAGGGGTTGAAGTTGCTCGTGACAGGAGGTCCTCGTGCACAGAAGGCAATTGGAATATGGCTGTTTGGCTCTGCTGCATGGGTGTTTAGCATGGTGATACTTGGTGGTTTAACGAGACTTACTAGATCCGGTCTTTCAATGACTGATTGGAAATTTGCGGGTGAGTTCCCTCCTTTGACAGATGAGGCATGGTTGCAAGAGTTTGAGAAATATCAGCAGTCACCTGAATACAAGCGTGTTAATAGAGGGATGAAGATTGAAGAATTCAAGTTCATATATTGGATGGAATATGGACATCGTATGTGGGGGAGGGCATTGGGATTAATGTTTGCTTTACCATATTCATATTTTCTCCATAAAGGGTATATTACAGTTAGATTAGGACTGAGACTCTCTGTTTTGTTTGGCCTGGGTGCCGGGCAGGGTCTCATCGGCTGGTGGATGGTTAAAAGTGGTTTAGAGGAACCAGCAACTGAATATTCTCAGCCAAGAGTAAGCCCTTATCGTCTTGCAGCTCACCTTACATCAGCATTTGCTATTTATTGTGGTCTCTTTTGGACTGCACTTTCTGTTGTTATGCCTGAGCCACCTGCCGAATCACTAGCATGGGTCCGCGGGGCAGCTAAAGTGAAGAGACTTGCGTTGCCTGTCAGCCTACTCGTTGGTCTTACTGCCGTCTCCGGTGCATTTGTTGCAGGAAATGATGCTGGGCATGCATTTAATACTTTTCCAAAGATGGGTGATACATGGATCCCAGAAGACATTCTTGAAATGAAACCTCTGATTCGCAATTTCTTTGAGAATACATCGACTGTACAGCTCAATCACCGGATTCTTGCTACTGCAACTCTAATTTCAGTGAGTGCCTTATGGCTGTTAACAAGGAAACTTGACTTACATCCTGCAGTGCGTTCTGTGATCGGAGGTGTCTTTGGCATGGCATCTCTTCAGGTCACCTTGGGAATTTCGACCCTTCTTTCATATGTACCTGTTTCGTTGGGTACTGCACATCAGGCCGGAGCCTTAACACTTCTGACGTTTATGTTACTGCTTAATCACACAGTTCGAAAGCCGTCCTTGGCGCTTCTCAAATCTCTGCCTCAGGCTGTCAAGGCACACTAA 1389 0.4579 MFGRGAIGSILKRSKEACLIQKLTGRSKTTAFRSSHPSSIAEQQSFKFCNPPVSAHFFRTFRSHLVPKGHHVPFTRNFSKTVSAAAGHKEGLKLLVTGGPRAQKAIGIWLFGSAAWVFSMVILGGLTRLTRSGLSMTDWKFAGEFPPLTDEAWLQEFEKYQQSPEYKRVNRGMKIEEFKFIYWMEYGHRMWGRALGLMFALPYSYFLHKGYITVRLGLRLSVLFGLGAGQGLIGWWMVKSGLEEPATEYSQPRVSPYRLAAHLTSAFAIYCGLFWTALSVVMPEPPAESLAWVRGAAKVKRLALPVSLLVGLTAVSGAFVAGNDAGHAFNTFPKMGDTWIPEDILEMKPLIRNFFENTSTVQLNHRILATATLISVSALWLLTRKLDLHPAVRSVIGGVFGMASLQVTLGISTLLSYVPVSLGTAHQAGALTLLTFMLLLNHTVRKPSLALLKSLPQAVKAH 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03639 462 Pfam Cytochrome oxidase assembly protein 108 437 IPR003780 GO:0006784|GO:0016020|GO:0016653
Vifa1g03639 462 Hamap Heme A synthase [ctaA]. 103 447 IPR023754 GO:0006784|GO:0016020|GO:0016653
Vifa1g03639 462 PANTHER CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX15 68 460 IPR023754 GO:0006784|GO:0016020|GO:0016653
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03639 K02259 - gmx:100784443 735.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03639 1 560731715 560734424 Vifa1g03639 1 560731715 560734424 ECH