Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03637 ATGGAACACTATGAGTCAAATATCACATTCCCTATCTCTTCTCCCGGAGTCAAATCCAATCAACCAGATGAAGCTTTAGATACAATGGCGATTAATGGACTTGGTCTTGTGAATCCTGAGAAAGTTTATCACTTCTACGATGAACTCCACTCGTATCTGGCATCTGCTGGTATCGATGGCGTCAAAGTTGATGTTCAGAATATCCTTGAAACTCTTGGATCAGGACATGGTGGGAGAGTGAAACTTGCCAGGAAATATCACCAGGCCTTGGAGGCGTCGATCTCGAGAAATTTTCCTGATAATGGAATCATTTGTTGCATGAGTCACAATACAGATGGATTGTATAGCGCAAAGCGTTCGGCGGTTATTAGAGCATCAGACGATTTCTGGCCTAGAAACCCTGCATCACATACGATTCACATTGCATCGGTCGCATACAATACTATTTTCCTTGGCGAGTTTATGCAGCCAGATTGGGACATGTTTTATAGCCTACATCCAATGGCTGAATATCATGCTGCTGCAAGAGCTGTTGGAGGCTGTCCTATATATGTCAGTGACAAGCCTCGACACCATGATTTTAATCTTTTGAAGAAGCTTGTACTTCCGGATGGTTCTATCCTAAGAGCTAAACTTCCTGGAAGACCAACCAAGGATTGTTTATTTGCTGATCCTGCTAGAGACGGAAAGAGTCTTCTAAAGATATGGAACATGAATGATTATTCTGGAGTTGTTGGAGTATTCAATTGCCAAGGAGCTGGTTGGTGCAAAGTTGGAAAGAAGAACCTTATCCACGACGAGAATCCAGGCACAGTAACAGGCATCATTCGGGCTAAAGATATTGACTATTTATCCACAGTTGCAGATGATAAATGGACAGGAGACGCTGTTATATTTTCTCATCTTTGTGGAGAAGTATTTTATCTTCCAAAGGATGTTTCTATTCCAATTACTATGAAATCGCGAGAATATGAAGTTTTTACAGTAGTCCCTGTGAAGGAGTTATCAAATGATGTCAAGTTTGCTCCTGTTGGTTTAATCAAGATGTTCAATTCAGGAGGGGCCATCAAAGAGTTCGGTTCTGGATTTAACGGAATTTCAAATGTTTCCATGAAAGTGCGCGGGTGTGGTCTATTCGGCGCTTATTCATCGGCTCGGCCGAAGTTGATAAATGTTGATTCAGAAGAGGTGGGATTCAGTTATGAGGAAGAATCAGGATTGGTGACTATTGAGCTCAGTGTTCCTGAGAAAGAGTTATACCAATGGAATATTTCTATTGATTTTTAA 1287 0.4134 MEHYESNITFPISSPGVKSNQPDEALDTMAINGLGLVNPEKVYHFYDELHSYLASAGIDGVKVDVQNILETLGSGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRNPASHTIHIASVAYNTIFLGEFMQPDWDMFYSLHPMAEYHAAARAVGGCPIYVSDKPRHHDFNLLKKLVLPDGSILRAKLPGRPTKDCLFADPARDGKSLLKIWNMNDYSGVVGVFNCQGAGWCKVGKKNLIHDENPGTVTGIIRAKDIDYLSTVADDKWTGDAVIFSHLCGEVFYLPKDVSIPITMKSREYEVFTVVPVKELSNDVKFAPVGLIKMFNSGGAIKEFGSGFNGISNVSMKVRGCGLFGAYSSARPKLINVDSEEVGFSYEEESGLVTIELSVPEKELYQWNISIDF 428
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03637 428 PANTHER - 1 425 IPR008811 -
Vifa1g03637 428 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g03637 428 SUPERFAMILY (Trans)glycosidases 31 200 IPR017853 -
Vifa1g03637 428 Gene3D Aldolase class I 12 201 IPR013785 -
Vifa1g03637 428 Pfam Raffinose synthase or seed imbibition protein Sip1 1 411 IPR008811 -
Vifa1g03637 428 MobiDBLite consensus disorder prediction 7 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03637 Vifa-Chr1 560488984 560490715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03637 1 426 Glycoside Hydrolase AT1G55740 71.963 0.0 634
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03637 K06617 - gmx:100785506 793.112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03637 1 560488984 560490715 Vifa1g03637 1 560488984 560490715 ECH