Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03562 ATGTCACCTCATGGGTTCTGCTTGCAATTTTCAAAAACTATATCGGTGCTTCCAGTGTCGCCTCCATCTAAATCAACTCCATTCTCTTCTATATTTGCACTTGGTGCTGTTATGGCTTTTGCATCCGGTCTTGCGAACACAAGCCTCAAGTATAACAGTGTTGGTTTCTACCAAATGGCCAAGATTGCTGTTACTCCAACAATTGTTCTAGCAGAGTTCATATTTTTTAAGAAAACCATTTCTTCAAAAAAGGTTTTGGCTTTAGCTGCTGTATCAGCTGGTGTAGCAGTTGCAACTGTATCAGATTTAGAGTTCAATTTATTTGGTGCTATAGTTGCAGTTATATGGATAATCCCAAGTGCGATAAATAAAATTTTATGGTCTACTTTACAGCAGCAAGGAAACTGGACAGCTTTGGCATTGATGTGGAAGACTACACCTATCACAGTTTTCTTCCTAGGGGCTTTGATGCCTTGGATTGATCCACCAGGAGTGTTATCGTTCAAGTGGGATGTAAACAGCTCGTCTGCAATTATGATATCCGCTCTTCTTGGTTTTCTCTTACAGTGGTCCGGTGCATTGGCATTAGGGGCAACTTCTGCTACAACTCATGTCGTTTTAGGACAGTTTAAGACCTGTGTCATTCTGTTGGGAGGTTATTTGTTATTCGATTCTGATCCGGGGATTATTAGCATTGCCGGAGCGGTTATTGCTCTCACTGGAATGTCAGTTTACACAACATATAACTTGCATGAGTCACAGGAAAATGCAACCAAGCAGCTTCCAAAGCATAATGTGCCTACACCAAAACAGAAACCAGCTAATGAAGATAACAAAGATTTGAGTGTAAATATTAACAATAACATTGTTGTGTGA 876 0.4018 MSPHGFCLQFSKTISVLPVSPPSKSTPFSSIFALGAVMAFASGLANTSLKYNSVGFYQMAKIAVTPTIVLAEFIFFKKTISSKKVLALAAVSAGVAVATVSDLEFNLFGAIVAVIWIIPSAINKILWSTLQQQGNWTALALMWKTTPITVFFLGALMPWIDPPGVLSFKWDVNSSSAIMISALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGYLLFDSDPGIISIAGAVIALTGMSVYTTYNLHESQENATKQLPKHNVPTPKQKPANEDNKDLSVNINNNIVV 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03562 291 SUPERFAMILY Multidrug resistance efflux transporter EmrE 22 101 - -
Vifa1g03562 291 PANTHER SOLUTE CARRIER FAMILY 35 20 249 - -
Vifa1g03562 291 Pfam Triose-phosphate Transporter family 27 245 IPR004853 -
Vifa1g03562 291 MobiDBLite consensus disorder prediction 256 291 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03562 Vifa-Chr1 553270111 553271610 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03562 8 272 Organic Solute Cotransporters AT1G77610 25.185 1.75e-14 70.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03562 - - tpra:123921378 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03562 1 553270111 553271610 Vifa1g03562 1 553270111 553271610 ECH