Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03560 ATGAGCGGCGGCGGTGGTGGCGGCTCTAGGGTTCCGATCCCCAACAATGTACGGAATACCATCATTGACATCAGAGAGATCACCGGAAAACAGCACACCGACGACGAAATCTACGCCGTCCTTAAAGAATGTTCCATGGATCCCAATGAGACCGCTCAGAAGCTTCTCTATTTAGATACTTTTCATGAGGTGAGAAGGAGGCGTGACCGGAAGAAAGAAGGATCGAGCAGCAGGGTCTCTGAGGAGTCTAGATCAAGGCAACGTGGACAGGGGAGGGGGGCAAGGGGAGCTTCAGGGGGCTATTCCTCAAACTTTTTTGATGGTGGCGGCGGGAGGAACTTTGCTAATCGAAGAGAAAATGGAGTCCATCATATTGCAGAGAGAACTAATGTTTCCTCTACACATACAGATTTGCAGAAAATATCTAATACACCACCTCAAGCCTCAAGGGGTTCAGCTCTTGCACCCCATAGTGCTGCAAATCCATCCAATGAGAAGTCTGGTCATGGTTCTTCTAACCAATCTCTCATAGGAAGTGTAGTGAGTGTCCCTAAAACCAGTTCAGCTGCTAATGACACTGTCAATCAAGAAAATATCCAACCTCAAGCTGTTGTTGCTGTTGTCGCAACCATTTCCCCTAACGAAACCGTCGGCTCAATTACAAGAACTGACCAAGGAAAATCTTCAAGTTCTGACCAAGGAAAATCTCTATCTAGTTCTGATCAACATCCAGTTTCTGTATCTAGTGTTTATTCCTCTTCAGATTCTATGCTGGTACCATCTATCGCCCAGAATCCTGGTGTTGGTGGTGCCATCAGTAGGGAAGTAGGGAATGACTTGATATCTACCGGGCCAAATCATGTTAAAGGAAACAAACTCGAAGAAGCTGGTGATTTATCAGCATCCGAGAAAGAAAAGTCCATGTCAATGATTTCAACTAGCAACCCAAATGCCTTACAGAAGTCAAATGAAGTTGAAAGTAACCAGTTATCTGAGCCCTTGCAACTCTCGTCCTCTTTATCATTGAATAGCTCTTTGAGACCACCTCAAGATGTTTCTGAAACAGCCAATGTCACAGAAGTCTCCGCTTCAGAAGCTCATGTGCAATCAACTGAGTTGAGGCCACATGTTACTTTTCCAAACCATTTCCAAGTGCCCGAGGCTTTGAAAAGTGGCCTGACATTTGGAAGCTTTGATAATTTTGGTACAAGTGAAAGATCTTATAGTGTAACTGGTTGTGACAATAGTACATCTTCCACTCCTGAAACTTCTCCAGGGAATGATGAAGCTGTTACTTCTAGCAACCAAAGTGTGCCTTTGATTGAACACGGAGGTCATGTTGATTATGCTCATTCTTCATCTTATCTAGTTACAACGACACTGGCTTCAGAAGGCATTTCTGTAACTGATAATGATTCAAAGATTGAGCAGCCAAAGCAGGAGCAAGTTCAATTTGACGGTAGTGAGCTTCAGGCCCAAGAAACATCACACTTACCTTCATTAGTTCATTTGTACTTTTTGAAATATTAA 1530 0.4386 MSGGGGGGSRVPIPNNVRNTIIDIREITGKQHTDDEIYAVLKECSMDPNETAQKLLYLDTFHEVRRRRDRKKEGSSSRVSEESRSRQRGQGRGARGASGGYSSNFFDGGGGRNFANRRENGVHHIAERTNVSSTHTDLQKISNTPPQASRGSALAPHSAANPSNEKSGHGSSNQSLIGSVVSVPKTSSAANDTVNQENIQPQAVVAVVATISPNETVGSITRTDQGKSSSSDQGKSLSSSDQHPVSVSSVYSSSDSMLVPSIAQNPGVGGAISREVGNDLISTGPNHVKGNKLEEAGDLSASEKEKSMSMISTSNPNALQKSNEVESNQLSEPLQLSSSLSLNSSLRPPQDVSETANVTEVSASEAHVQSTELRPHVTFPNHFQVPEALKSGLTFGSFDNFGTSERSYSVTGCDNSTSSTPETSPGNDEAVTSSNQSVPLIEHGGHVDYAHSSSYLVTTTLASEGISVTDNDSKIEQPKQEQVQFDGSELQAQETSHLPSLVHLYFLKY 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03560 509 MobiDBLite consensus disorder prediction 274 370 - -
Vifa1g03560 509 MobiDBLite consensus disorder prediction 66 89 - -
Vifa1g03560 509 MobiDBLite consensus disorder prediction 216 251 - -
Vifa1g03560 509 MobiDBLite consensus disorder prediction 406 433 - -
Vifa1g03560 509 Pfam GBF-interacting protein 1 N-terminal 13 73 IPR009719 -
Vifa1g03560 509 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 483 IPR044277 -
Vifa1g03560 509 MobiDBLite consensus disorder prediction 305 370 - -
Vifa1g03560 509 SUPERFAMILY UBA-like 13 76 IPR009060 GO:0005515
Vifa1g03560 509 MobiDBLite consensus disorder prediction 126 176 - -
Vifa1g03560 509 MobiDBLite consensus disorder prediction 66 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03560 Vifa-Chr1 553262225 553267039 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03560 - - psat:127117563 733.021
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03560 1 553262225 553267039 Vifa1g03560 1 553262225 553267039 ECH