Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03558 ATGGCAAGCACCGATTTGAAGTACGAGGTTTCACAAAACGCTTACATCAAACTCGTTCTCCACTCCCTCAAACACCCCACATCCGCCGTCAACGGCGTCTTGATCGGCCGCATCTCCCCTTCCAACGCCACCGTCGAGATCACCGATGCCGTCCCTCTCTTCCATTCTCAAATTCCTCTTCTTCCTCAATTGGAGATCTCTCTAATTCTGATAGATGAATATTTTTCTGCTAAAGGGTTGAACATAGTTGGTTATTTTCATGCCAATGAGAGGTCTGATGAATTTGAACTCGGCGGTGTGGCGAAGAATATTGGTGATCACATCTCTCGTTACTTTCCACAAGCTGCTATTCTATTGTTAGATAACAAGAAGCTTGAAGGTTTGAAGAAGAGTAAGAGTAGTGGTGCGGTAATGCAGCTTTATGTTAGGGATGCATCTAAGAACTGGAAGTTGGTTCAATCAGATGCAAACAACAGATTCTCTCTCAAAGAGCCTTCTGCGAATCTGATATTGTTGGACTATATTTCATCTGAGAAATGGCGCGGCATTGTAGATTTTGATGACCACCTTGATGACATAAGCAAGGATTGGCTAAACCCAGAGCTCTTCAACTGA 615 0.439 MASTDLKYEVSQNAYIKLVLHSLKHPTSAVNGVLIGRISPSNATVEITDAVPLFHSQIPLLPQLEISLILIDEYFSAKGLNIVGYFHANERSDEFELGGVAKNIGDHISRYFPQAAILLLDNKKLEGLKKSKSSGAVMQLYVRDASKNWKLVQSDANNRFSLKEPSANLILLDYISSEKWRGIVDFDDHLDDISKDWLNPELFN 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03558 204 ProSiteProfiles MPN domain profile. 8 137 IPR037518 -
Vifa1g03558 204 Pfam Uncharacterised protein family (UPF0172) 7 202 IPR005366 GO:0072546
Vifa1g03558 204 CDD MPN_UPF0172 10 199 IPR005366 GO:0072546
Vifa1g03558 204 PANTHER ER MEMBRANE PROTEIN COMPLEX 6 204 IPR005366 GO:0072546
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03558 K23569 - gmx:100527135 347.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03558 1 552534967 552536607 Vifa1g03558 1 552534967 552536607 ECH