Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03555 ATGGCAGGGGTCGATGGAGATACATTTCCTGTTCATACTAAGGACCAGGAATCCAAACTTTCAATCAAAGATTCAGAGACAGAAGAAGTGAACGATTCACCTATAGAGCAGGTGAGACTAACAGTGCCAATAACAGACGACCCTTCACAACCAGTACTCACATTTAGGACATGGGTTATTGGTTTGGGAAGTTGCATTATCCTTGCCTTTGTAAACCAATTCTTTACGTTCAGAACCACCCCTCTATATGTCTCTACTGTGGCAGCACAGATTGTTTCTCTCCCAATGGGAAAACTAATGGCTGCAACACTTCCTACCACAATATATAAACTCCCCTTCATTAACTGGTCTTTCACATTGAATCCTGGACCCTTCAGTATGAAGGAACATGTCCTCATTACCATCTTTGCTACTTGTGGAGGTAATAGTGCTTATGCCATTAACATTATCGCCATTGTTAAGGCTTTTTACAAAAGGAGTATCAATCCAGTTGCTGCTCTTTTGCTAGCAATGACAACTCAGATGCTTGGTTATGGATGGGCTGGTATTTTCAGAAAGTTCCTTGTGGACTCTCCCTACATGTGGTGGCCTTCAAATCTTGTCCAGGTGTCTCTATTCAGGGCATTTCATGAGAAAGAGCATAGGCCTAAAGGAGGAAACACAAGGCTGCAATTCTTTTTACTGGTCTTTATTGCTAGCTTTAGTTATTACACCATTCCAGGCTACTTTTTCCAATCACTATCAACTATCTCTGTTGTTTGTTTGATATGGAAAAAATCTGTCACTGCTCAGCAGATTGGTTCAGGAATGAAGGGTCTTGGTATCGGTTCATTTACCCTTGATTGGAACTCTGTTGTTGGTTTCTTAGATAGTCCTTTGCCTGTTCCTGGTTTTGCCATCATCAACCGGCTTGCTGGATTTTTCATATTTATCTATATTGTGCTGCCCATTACCTATTGGAACAATTTTTACGAAGCCAAAAAATTTCCAATGATCAGTTCTCACACATTTGATTCTACTGGTGCAATATATAATGTTAGCAGGGTTCTTAATAAAGAAACCTTCGACATTGATTTGGTTGGTTATAACAATTACAGCAAACTCTATCTTAGTATCATATTTGCATTTGACTATGGGTTGAGCTTTGCAATTCTCACTGCCACCATTTCTCACGTTTTCCTCTTCCACGGAAAAGAGGTTCTTGTGATGTGGAGGAAGACAACAGCCGCACTAAAAGGACAAGCCGGAGACGTGCATACAAGAATCATGAAGAAAAACTACGCACAAGTCCCTGAGTGGTGGTTCATGTCAATTTTAGTCCTTATGATTATTCTGGCCTTGGTATGTTGTGAAGGCTTTGACAAGCAACTCCAACTTCCATGGTGGGGAGTTTTACTTTCCCTAGTAATTGCATTGGTTTTCACTTTGCCAATTGGTGTCATTCAAGCAACAACAAACCTGCAACCCGGGCTAAATGTGATCACAGAGTTGATCATTGGGTACCTTTACCCCGGAAAGCCTCTTGCTAATGTTGCCTTCAAGACTTACGGATACATCAGCATGGCGCAGGCACTTACTTTTATTAGTGACTTCAAATTAGGCCACTACATGAAAATTCCTCCGAGATCCATGTTCGCAGTACAGTTGGTAGGAACTGTGGTTGCTACAACTGTAAACTTTGCCACAGCATGGTGGCTTCTAACATCTATTCCAAACATATGTAACCCAGCATTGTTGCCAGAAGGTAGTCCTTGGACTTGTCCCGGTGATGATGTGTTTTACAATGCTTCAATCATATGGGGAGTAATAGGACCACAGAGAATGTTCACCAAGGACGGAATATACCCTGGAATGAACTGGTTTTTCCTAATCGGTCTACTAGCGCCTGTTCCGGTTTGGTTCCTAGCTCGCAAGTACCCGAACCACAAGTGGATTGAACTCATCCACTTGCCACTTATCTTTTCAGGTGGCGCGAGTATACCACCAGCTAGAGCAGTGAATTACCTTTCATGGGGAGCTGTTGGAATTCTCTTCAATTTCTATATTTACAAAAAGTACAAGACATGGTGGGCTAGACACACTTACATTCTCTCAGCTGGTATGGATGCTGGTATTGCTTTCATGGGTGTGTTACTCTTTTTTGCGCTTCAAAATTACGATATCTTCGGTCCAGCTTGGTGGGGTCTTGACGGAACTGATCACTGCCCCTTGGCTACTTGTCCTACAGCTCCTGGTGTAAAAGCCAAGGGATGTCCTACCTTTTAA 2265 0.4225 MAGVDGDTFPVHTKDQESKLSIKDSETEEVNDSPIEQVRLTVPITDDPSQPVLTFRTWVIGLGSCIILAFVNQFFTFRTTPLYVSTVAAQIVSLPMGKLMAATLPTTIYKLPFINWSFTLNPGPFSMKEHVLITIFATCGGNSAYAINIIAIVKAFYKRSINPVAALLLAMTTQMLGYGWAGIFRKFLVDSPYMWWPSNLVQVSLFRAFHEKEHRPKGGNTRLQFFLLVFIASFSYYTIPGYFFQSLSTISVVCLIWKKSVTAQQIGSGMKGLGIGSFTLDWNSVVGFLDSPLPVPGFAIINRLAGFFIFIYIVLPITYWNNFYEAKKFPMISSHTFDSTGAIYNVSRVLNKETFDIDLVGYNNYSKLYLSIIFAFDYGLSFAILTATISHVFLFHGKEVLVMWRKTTAALKGQAGDVHTRIMKKNYAQVPEWWFMSILVLMIILALVCCEGFDKQLQLPWWGVLLSLVIALVFTLPIGVIQATTNLQPGLNVITELIIGYLYPGKPLANVAFKTYGYISMAQALTFISDFKLGHYMKIPPRSMFAVQLVGTVVATTVNFATAWWLLTSIPNICNPALLPEGSPWTCPGDDVFYNASIIWGVIGPQRMFTKDGIYPGMNWFFLIGLLAPVPVWFLARKYPNHKWIELIHLPLIFSGGASIPPARAVNYLSWGAVGILFNFYIYKKYKTWWARHTYILSAGMDAGIAFMGVLLFFALQNYDIFGPAWWGLDGTDHCPLATCPTAPGVKAKGCPTF 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03555 754 Pfam OPT oligopeptide transporter protein 53 715 IPR004813 GO:0035673
Vifa1g03555 754 MobiDBLite consensus disorder prediction 10 27 - -
Vifa1g03555 754 NCBIfam OPT family oligopeptide transporter 37 717 IPR004813 GO:0035673
Vifa1g03555 754 PANTHER ISP4 LIKE PROTEIN 25 752 IPR004648 GO:0055085
Vifa1g03555 754 MobiDBLite consensus disorder prediction 1 27 - -
Vifa1g03555 754 NCBIfam small oligopeptide transporter, OPT family 31 719 IPR004648 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03555 Vifa-Chr1 552523056 552526439 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03555 17 754 Organic Solute Cotransporters AT4G26590 68.564 0.0 1060
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03555 - - gmx:100776230 1224.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03555 1 552523056 552526439 Vifa1g03555 1 552523056 552526439 ECH