Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03527 ATGGATGTTCCGTTGCCGTTAGATAAATTAGCTTTAGAATTGATTAGTAATGAACCCTCCCCAGGAAGTACAAACATTGGCAACATATATGTCATTCTGGTAGCAACTGGAAGCTTCAATCCACCTACTTTGATGCATTTACGCATGTTTGAGCTTGCAAGAGATGCATTGAATTCCAAAGGTTACTGCGTAATTGGAGGTTACATGTCACCTGTGAATGATGCCTACAAGAAAAAGAACCTAATATCTGCTAGCCATCGGATACAATTATGTCATTTAGCCTGCAAAAGTTCAGAATTCGTAATGGTTGATCCATGGGAGGCAAACCAAAGTTCATACCAACGCAGTCTAACTGTACTGTCCAGAGTTCACACTTCAATTTGTGAGACAGGGTTGGTATCTAAAGAATCTCTGAAAGTCATGCTTGTCTGTGGTTCTGATCTCCTCCATTCCTTTTCTGTTCCTGGAATATGGGTTCCTGATCAGGTTAGAAGTATCTGCAGAGATTATGGCGTAGTATGCATTCGCAGAGAAGGACAAAATGTTGAGAAGACTATATCCAATGATGAAATTATGAATGAAAATCAGGCTAATATTGAAGTTGTAGATGAACTTGTACCAAATCAAATCAGCTCAACAAGAGTGAGGGAATGCATTGCAAGAGGATTATCAATAAAATATCTTACTGCAGATGAAGTCATTGAATATATCAGAAAAAATAAGTTATACTTAAACTCAAATGATGAATAG 750 0.3773 MDVPLPLDKLALELISNEPSPGSTNIGNIYVILVATGSFNPPTLMHLRMFELARDALNSKGYCVIGGYMSPVNDAYKKKNLISASHRIQLCHLACKSSEFVMVDPWEANQSSYQRSLTVLSRVHTSICETGLVSKESLKVMLVCGSDLLHSFSVPGIWVPDQVRSICRDYGVVCIRREGQNVEKTISNDEIMNENQANIEVVDELVPNQISSTRVRECIARGLSIKYLTADEVIEYIRKNKLYLNSNDE 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03527 249 PANTHER NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 24 246 - -
Vifa1g03527 249 FunFam Nicotinamide-nucleotide adenylyltransferase 28 248 - -
Vifa1g03527 249 Gene3D HUPs 28 249 IPR014729 -
Vifa1g03527 249 NCBIfam nicotinate (nicotinamide) nucleotide adenylyltransferase 35 243 IPR005248 GO:0009435|GO:0016779
Vifa1g03527 249 Pfam Cytidylyltransferase-like 34 217 IPR004821 GO:0003824|GO:0009058
Vifa1g03527 249 SUPERFAMILY Nucleotidylyl transferase 31 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03527 Vifa-Chr1 546762746 546767893 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03527 K06210 - gmx:100793809 422.165
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03527 1 546762746 546767893 Vifa1g03527 1 546762746 546767893 ECH