Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03523 ATGGCATCTCTAGCACTATCATCTCTCTATCTCTCATACAAACCCCTCCAATCCTCCTTTCTCCTCTCCTCATCAAACCCCTCTTCTCTTCTCACTCTAAACTTTCACCCCAAAAAATTCCCCAAATCCAACAAACTCAGAACCCTAGTTGTCGCCAAATCCAATGACAGTGACTCAGCTGATGCTTCTGACCGTTTAATTTCCGCCCTCTGTTACTTCTTCCCCTTTTTTGATGGCATACAGTATGGAAAATTTGTAATGACTCAATTCTACCCCATTCAAGCTATTGTTGAACCCTTGATTCCTGCAATTAGGGTTTTTAAGAGTTTCCCCTTGAATGACTTTCTTGTGTTTTTTACCCTTTACTTTTTTGTTGTCAGAAACCCTAACTTCAGTAGATATGTCAGGTTCAATACAATGCAAGCTATTGTGCTTGATATGCTCTTGATTTTTCCTGACCTTTTGGAAAGAGGGTTTAATCCAAGAGGTGGGATTGGGTTGGATTTGATTATGAGTTTCGATAGTACTGTGTTTTTGTTTCTGTTGGTTTGTTTGATTTATGGCTCCTCTTCTTGCATTTTGGGCCAGTTGCCTAGGTTGCCCATTGTTGCTGATGCAGCTGATATGGAAGTTCTTTGA 639 0.4038 MASLALSSLYLSYKPLQSSFLLSSSNPSSLLTLNFHPKKFPKSNKLRTLVVAKSNDSDSADASDRLISALCYFFPFFDGIQYGKFVMTQFYPIQAIVEPLIPAIRVFKSFPLNDFLVFFTLYFFVVRNPNFSRYVRFNTMQAIVLDMLLIFPDLLERGFNPRGGIGLDLIMSFDSTVFLFLLVCLIYGSSSCILGQLPRLPIVADAADMEVL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03523 212 PANTHER PROTEIN TIC 20-II, CHLOROPLASTIC 18 211 IPR005691 -
Vifa1g03523 212 Pfam Chloroplast import apparatus Tic20-like 64 207 IPR005691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03523 Vifa-Chr1 546112564 546113202 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03523 - - cam:101513867 311.997
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03523 1 546112564 546113202 Vifa1g03523 1 546112564 546113202 ECH