Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03500 ATGTCTCTCAGAATTCTCCGATCTCGATTCTCCTCCGTCGCATCATCTTCATCGAAGCGATTCCTCTCCACCAGTGCAGCTCCCGCTGCTCCTCAACCTCCTCCTCCTTCAGCCACTACTTCCTCTAACCGCTGGAATTTCCTCAAATACGCCGTTATCGGTGCTTTCACCGGAACCACTGCCCTAACCGGCTATGCTTCTTACGCTTATAGTGCGGACGAAATTGATGAGAAAACGAAGTTGTTTCGTCAATCGGCTAAGAACACTCCAGCTGATGGAGCTACTGCTCTCGATAAATTTCAAGGGCTTATATACTCAACTGCAGTAACAGTGCCTGCTAAAGCAATCGAGCTTTATTTGGACGCTAGAAGGTTAATTGAAGAACAAGTTAGGAGTTATACGGAACCATACACAGACAAGCTCCTTCCAGATTTGCTTCCTCAGGAGCAACATGTGTTCACACTTGTTCTAGATCTCAATGAAACATTGATTCACTACATTTGGACACGAGATACTGGCTGGCAGACTTTTAAAAGACCCGGAGTTGATGCTTTCTTAGAACATCTAGCTCAGTTCTATGAAATAGTAGTGTATACAGATGAACAAAATATGTTTGTAGACCCTGTTATAGAGAGGCTGGATCCCAAGCACTGCATTAGGTACAGGCTATCAAGGCCTGCTACTAAGTATCAGGATGGGAAACACTATAGAGATCTTACAAAACTAAACAGGAATCCTGCAAAAGTTATGTACTTAAGTGGCCATGCTCTTGAAAGTTGCCTACAACCTGAAAACTGTGTCCCTATTAAGCCATGGCTGCAGACTGATAAAGATGATACAGCTCTTGTAGATTTCATACCATTCCTTGAGTTTGTTGCCCGTAGTAGTCCGGCTGATATAAGACCGGTGCTACAGTCTTACCAAGGATCTGACAGTGATATTCCAAGTGAATTCATCAGGCGTTCCAAAGAGCATATGAGGAAAACGCAAGGACAGAAACGCTTCTGGAAATGA 1014 0.4398 MSLRILRSRFSSVASSSSKRFLSTSAAPAAPQPPPPSATTSSNRWNFLKYAVIGAFTGTTALTGYASYAYSADEIDEKTKLFRQSAKNTPADGATALDKFQGLIYSTAVTVPAKAIELYLDARRLIEEQVRSYTEPYTDKLLPDLLPQEQHVFTLVLDLNETLIHYIWTRDTGWQTFKRPGVDAFLEHLAQFYEIVVYTDEQNMFVDPVIERLDPKHCIRYRLSRPATKYQDGKHYRDLTKLNRNPAKVMYLSGHALESCLQPENCVPIKPWLQTDKDDTALVDFIPFLEFVARSSPADIRPVLQSYQGSDSDIPSEFIRRSKEHMRKTQGQKRFWK 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03500 337 CDD HAD_FCP1-like 153 269 - -
Vifa1g03500 337 PANTHER DULLARD PROTEIN PHOSPHATASE 44 319 - -
Vifa1g03500 337 SUPERFAMILY HAD-like 140 305 IPR036412 -
Vifa1g03500 337 Gene3D - 138 324 IPR023214 -
Vifa1g03500 337 FunFam Mitochondrial import inner membrane translocase subunit TIM50 139 324 - -
Vifa1g03500 337 SMART forpap2 151 279 IPR004274 -
Vifa1g03500 337 ProSiteProfiles FCP1 homology domain profile. 148 292 IPR004274 -
Vifa1g03500 337 Pfam NLI interacting factor-like phosphatase 154 301 IPR004274 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03500 K17496 - gmx:100803155 539.65
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03500 1 544138021 544141634 Vifa1g03500 1 544138021 544141634 ECH