Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03468 ATGGCTTTCGAATCTTCGGTTTTGGGTCACCATGTCTTCAGTTCGGGTCCTTTCAGTTCTACAACCTTTCATGGTTCAAATGGTTCATATGGTTCAAGTTTTGTAAACAATGTTAAGTTAGTTCGTGGAACTAGCTTGAAAATGAAGTGTCTTGGTAGTAGTGATAGTGAAAGTGTTGTTTCCAATTCCAATGCTAATTTGAAGTTCATAGATGAGTTTTTGGTGAAAAGAGGGATTGTTTTGGCTGCTACTGTTTGTGGGGTGTTGGTGTTTGGCTGTCCGGAAGTTTTTGCCTCGGAAGGTCTTTCTGCGTTTTTCTCTCTCGCGGAGACATCAATTACTACACTTTGGCCTTGGAAGGTTCGTGAGTTGGCTGAAAAAGAGACTGAAAATGGTGTCTTCAGACTACTCCGAAGCGATGTTACTCGATTCCTAACTACCATACTTATCGGCACAACTGTGGTAAATATTGCAGCGACTGCTTTGGTCACAGAAGCTGCAACTGCAGCATTTGGCGAAGCTGGTGTTAGTGCAGCAACAGGAGTGATGACTGTTGCCATTTTGCTTCTCACTGAAATCACTCCAAAGAGCATTGCAGTTCACAATGCCACAGAGGTGGCTCGGTTTGTGGTCAGGCCAGTGGCATGGCTTTCTCTGGTACTGTATCCCGTTGGAAGGATTGTTACCCTTCTTTCAATGGGGATGCTTAAATTGCTTGGCTTAAAAGGAAGTAGTGAGCCATATGTAACCGAAGAGGAGCTAAAACTGATGCTAAGGGGTGCAGAATTAAGTGGGGCAATAGAAGAGGAAGAACAGGATATGATTGAAAATGTGTTGGAGATAAAAGACACACATGTCAGAGAAGTTATGACACCTCTTGTTGATGTTGTTGCAATTGATGCAAGTTCAAGCCTTGTAGATTTTCATCACTTGTGGGTCACACATCAATACTCAAGGGTACCTGTTTTTGAGCAACGTGTTGATAATATTATGGGTATAGCGTATGCGATGGATCTGCTCGATTATGTTCAAAAGTTTGCAGAATTATAA 1050 0.4238 MAFESSVLGHHVFSSGPFSSTTFHGSNGSYGSSFVNNVKLVRGTSLKMKCLGSSDSESVVSNSNANLKFIDEFLVKRGIVLAATVCGVLVFGCPEVFASEGLSAFFSLAETSITTLWPWKVRELAEKETENGVFRLLRSDVTRFLTTILIGTTVVNIAATALVTEAATAAFGEAGVSAATGVMTVAILLLTEITPKSIAVHNATEVARFVVRPVAWLSLVLYPVGRIVTLLSMGMLKLLGLKGSSEPYVTEEELKLMLRGAELSGAIEEEEQDMIENVLEIKDTHVREVMTPLVDVVAIDASSSLVDFHHLWVTHQYSRVPVFEQRVDNIMGIAYAMDLLDYVQKFAEL 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03468 349 Gene3D - 294 345 - -
Vifa1g03468 349 SUPERFAMILY CBS-domain pair 273 344 IPR046342 -
Vifa1g03468 349 ProSiteProfiles CBS domain profile. 290 349 IPR000644 -
Vifa1g03468 349 PANTHER HEMOLYSIN-RELATED 101 345 - -
Vifa1g03468 349 Pfam Cyclin M transmembrane N-terminal domain 101 271 IPR002550 -
Vifa1g03468 349 ProSiteProfiles CNNM transmembrane domain profile. 85 271 IPR002550 -
Vifa1g03468 349 Gene3D - 257 293 IPR046342 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03468 Vifa-Chr1 539741729 539746820 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03468 - - tpra:123920331 500.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03468 1 539741729 539746820 Vifa1g03468 1 539741729 539746820 ECH