Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03414 ATGACAACATCAAAAACAATCTCAGCAGCACTCAAACTCGTTGACACCAAGAAACAAAATCTCAAAAAAGCATACGATGATCTTCAATCCCATTCCCCTCTCCTCTCTTCCTTCCCTCTCTCATGGCCAGACCTCGATTCTCACTTCTCCACCCTCCACAACACTCTCTCTCAACGCTTCACCCATCTCCAAACCCTAGAATCACAACTACATCAAAACCATAACGACCCTTCATCTTCTCCTTCTCAGTTACCTAACCCAAACCCTAAAAATCAAAACTTTACATCAATCGCTAATGACCCATCTTCGTCTTCTAACCCTACAAATCACTTGGAAGCATTGACTGCGTTTTGTAAGAACAATGATGGAAAAGGGTTGAGGATTTACATTGGGGATAATTTTAAGGACAAGGGAATAATGAAAAATGAAATTCAGATTGCATTCAAATCTGCGTCTAATCCTGCTGATATGGTTCTTGATTCAATTGAGGGTGTTTTTGTTGCAAATGCAGTGATTGAAGGGAAAGAACCTAGGTTTATCAAGAAAAGTTTTAGTTTTTTGTTTCAACAGTTGAGGGTTTTTTCTCCGTATGTTAGTTTTGATGTTAGGAAGAAAGCTAAGAGATTGTTTAATGAGTGGAAGGTAAGCATGGTGAATGAGAATCCTGAGGCGAGTTGGGCTATGGCTTTTATGCAATTTGTTGCTGTTTATGGTTTTTTATCTGAATTGAATTTGGGTGAGCTTGCTGCTTATTGTGCTTCTGCTTCTGCTAGTGACGATCTTCCTGATCTGTACCAGATTCTTGCTTTGTCAGATAGAGTTCAAGGAGTTATTCAGAAACTTATTGAAAGAAGCAAACATATTTTGGCTGTCAAGTATATTTTTCACTTCAAACTTACCGATAAGATGCCACCAGTTCCCATTTTGAAAGCTTGCGTGGATGATGCGCAAAAACTCGGTAAAAGACTTGCCTCCGAGGGAAAGTCATTGAATGAGATCAAATCTAGAGAAATCCAAGCACTGAAATCAGTGATTAAGGTTATTGAGAGTTATAACCTTGATTCTGAGTTTCCGCGTGCAAGCATTGAACAACGTATAGATGAATTGAATAAGCAGCGCAGAGTCGGTGGAAAGACTGTTGCACCAGCTTTTGCTGCAAAGCCTCTTCTTCAACAACAACAACTTAGTGGAATCAAGCGTCCTCTAACCACTGCTCCATTCGGTGTCGGTAATGCCACATCTACCATATACCAATACCAACAACCTCATTTCCAGCCCACAAGTTTGTTGCCGGAACATCCAAATCCATACACAAGCATGCCACCAGCGCCGTTTGGCATGAAGGCACCAACACCAAATGTCCCCTCCTATACAGTTCCTTCAACTGCACCGCCTTATGGTCTTGATGGTGTCTCAATGGCTCCCAATGGAAACCTCAATCAATCTATTTCTCATCCGAATTCATCACAACAACCACTAGTTATGCCGGGTTATTATGCCCCAATAGGTCCCAGCAGCAACATCGGTCAAGGTGGTTCTCATCCTAACCTGCCAGAGCCACGAGTTATGCCGGGTTATTACGCCCCAATGAGTTCCAGTGGCAACCTCGACCAAGGTGGTTCTCATCCGAATCCGTCTGCTTCTGGCGGCTATGGTATGCAACATTATTACAGAACACCTTATTCTCAATAG 1692 0.422 MTTSKTISAALKLVDTKKQNLKKAYDDLQSHSPLLSSFPLSWPDLDSHFSTLHNTLSQRFTHLQTLESQLHQNHNDPSSSPSQLPNPNPKNQNFTSIANDPSSSSNPTNHLEALTAFCKNNDGKGLRIYIGDNFKDKGIMKNEIQIAFKSASNPADMVLDSIEGVFVANAVIEGKEPRFIKKSFSFLFQQLRVFSPYVSFDVRKKAKRLFNEWKVSMVNENPEASWAMAFMQFVAVYGFLSELNLGELAAYCASASASDDLPDLYQILALSDRVQGVIQKLIERSKHILAVKYIFHFKLTDKMPPVPILKACVDDAQKLGKRLASEGKSLNEIKSREIQALKSVIKVIESYNLDSEFPRASIEQRIDELNKQRRVGGKTVAPAFAAKPLLQQQQLSGIKRPLTTAPFGVGNATSTIYQYQQPHFQPTSLLPEHPNPYTSMPPAPFGMKAPTPNVPSYTVPSTAPPYGLDGVSMAPNGNLNQSISHPNSSQQPLVMPGYYAPIGPSSNIGQGGSHPNLPEPRVMPGYYAPMSSSGNLDQGGSHPNPSASGGYGMQHYYRTPYSQ 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03414 563 MobiDBLite consensus disorder prediction 531 548 - -
Vifa1g03414 563 PANTHER FRIGIDA-LIKE PROTEIN 3-RELATED 101 387 - -
Vifa1g03414 563 MobiDBLite consensus disorder prediction 69 108 - -
Vifa1g03414 563 Pfam Frigida-like protein 112 373 IPR012474 -
Vifa1g03414 563 MobiDBLite consensus disorder prediction 506 554 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03414 Vifa-Chr1 531173562 531176175 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03414 - - tpra:123921905 708.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03414 1 531173562 531176175 Vifa1g03414 1 531173562 531176175 ECH
Vifa1g03414 1 531173562 531176175 Vifa1g03414 1 531173562 531176175 PCT