Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03408 ATGGCGACGGCGGATTCCGACGGTATCACACCGCCTCATGAGGAGGATTCTTCCAACGCCATCGTTCCCGGCCCTACTTCCGTTTGTCTTATCCGTTTCGCCGCTGAGTCCGCCCAAGGCGCTCTCATGGGTTCCGTTTTTGGATTCGGTGCTGGATTGTTTAAGAAGAAAGGATTTAAAGGATCCTTTGTAGATGCTGGATCTTATGCAAAGACATTTGCAGTTTTGTCTGGAGTTCATAGTTTGGTTGTTTGCATCTTGAAAAGAATTCGAGGAAAGGATGATGTCATTAACGCTGGAGTAGCTGGATGCTGCACTGGACTTGCTCTAAGTTTTCCGGGTGCACCACAGGCTCTTCTGCAGAGCTGCCTCACTTTTGGAGCATTTTCTTTTATCCTGGAAGGGCTAAACAAACAGAAACCAGCACTTGCACTTCCCATGTCCTGGAAAACAAGGGTGCAACACAATGCACGACTTCCCTCGGTACTCCCCCTTCAATTCCCTCTTCCAAATGAAGTGAAAGAAGCTTTCTCCTCTTTCTCAGAGTCTCTAAAAAAGCGCAGCAAGGGAGCTTATCCTACATCTTGGTAA 591 0.4772 MATADSDGITPPHEEDSSNAIVPGPTSVCLIRFAAESAQGALMGSVFGFGAGLFKKKGFKGSFVDAGSYAKTFAVLSGVHSLVVCILKRIRGKDDVINAGVAGCCTGLALSFPGAPQALLQSCLTFGAFSFILEGLNKQKPALALPMSWKTRVQHNARLPSVLPLQFPLPNEVKEAFSSFSESLKKRSKGAYPTSW 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03408 196 MobiDBLite consensus disorder prediction 1 21 - -
Vifa1g03408 196 PANTHER MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM22 23 152 IPR039175 GO:0042721|GO:0045039
Vifa1g03408 196 Pfam Tim17/Tim22/Tim23/Pmp24 family 33 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03408 Vifa-Chr1 530453619 530455986 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03408 14 189 Miscellaneous Gene Families AT4G26670 67.956 5.22e-80 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03408 K17790 - gmx:100813557 298.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03408 1 530453619 530455986 Vifa1g03408 1 530453619 530455986 ECH