Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03343 ATGGCCTCCCTCAAAAACCTTCTCTCACAACGCCGTTTCCACCAACTCATAAACCCCAAAACCCTAAATCCCCTCCATTACAATTTCACACTCAGACCCATCGCAACCTCACCCCAAACCCAGCAAATCAAAAAACCCCTCAGCACTTTCTTCTCCGAAGTAATGTCAGGTAAAACCACAACAATAGAAGAAAACAATCACGGCGACGTCGAAATGGAGAAAAAACTGAAGCAATTAACAGAAGAAGTTAGAATCTTGAAGGAGAAAAAAACAAAAGGGGTTCCGATTTTTACAAAAGAGGTTCCAAAGAAAGTTGATAAGAGGAGTTTGTTTTCTGTGTTTACCAATCAGCCTCCTCCTGATGGTGTAATAAGTGCGAAAAAGCAGAAGCCGAGGGAGCCTTTTGTTGTTAAGGAGCTTTCAATTGATATGGTGCTGTTTTTGAAGTATCTATATGGAAATGGGTATTTTAAGGATGCCAAATTTGATAACGTTCATGAAAGATTTGATCTTGGTTGGTTTGAGAATCCTTATGCTTTGGGGTATGCGAAGTTTGCAGCACAGAAATTTGCAAGTGATAATCTTGAAATTGCCAAATGGCTATCAGGAAGTGCAATAAGGCAAGTGGCGGTGTTTGGCTGCCCCTCCACTGGCAAGAGTTGTGTCTTCCCTGCGAAAAGACTGCGGAAATTTTTTGAGGTTCCAGAAAATACAGTTTGTGGTAAATGCATGCTGCGAAAATCATGCAAGTTTGCGAATCAAAACGTGTGGAAGTGTGATGCCAATAAATTGGACATGGAGTTAGTTATGAAGGTTGTGATTTCATATGCTTTACACTTGGTGCATCCTCACCTAGTAGTGTCTGATGAAGTGAACAAGTCAGTAAATCATTTACTGAGCGAGTTTGTGAAACTGAGTAAAATCACCTGA 930 0.4075 MASLKNLLSQRRFHQLINPKTLNPLHYNFTLRPIATSPQTQQIKKPLSTFFSEVMSGKTTTIEENNHGDVEMEKKLKQLTEEVRILKEKKTKGVPIFTKEVPKKVDKRSLFSVFTNQPPPDGVISAKKQKPREPFVVKELSIDMVLFLKYLYGNGYFKDAKFDNVHERFDLGWFENPYALGYAKFAAQKFASDNLEIAKWLSGSAIRQVAVFGCPSTGKSCVFPAKRLRKFFEVPENTVCGKCMLRKSCKFANQNVWKCDANKLDMELVMKVVISYALHLVHPHLVVSDEVNKSVNHLLSEFVKLSKIT 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03343 309 Coils Coil 69 89 - -
Vifa1g03343 309 PANTHER ZINC FINGER PROTEIN 143 307 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g03343 186 308 EF-hand Containing Proteins AT1G55040 32.558 1.12e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03343 - - tpra:123894908 437.958
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03343 1 521230743 521232268 Vifa1g03343 1 521230743 521232268 ECH