Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03329 ATGTCATCTTCTTCTACCTTAATAACATACATGATACTGTCCTTTTTGTTCTTTGTACATATTGATGGCAATAATCAACCATGCAGCGATAAATTCGCGAAACTCATCGAGCAAAGAAACATAACAGTATGCAAGAGATTACGAACTCAAGGAGCCGAATTCGGTTGGAACTACCACAACGGCACAAACTCAACCACAACACTTGAAATCTTATTTGGTGCAATTTTAGATACAAGCCAAGGGTGGATAGCTTGGGGTGTGAATCCAGGAGAAAGAGCAGAAATGATTGGAACAAAAGCAATCATAGGGATTAAAAACCCTGATTTTGCTACTACTTCATCACCACCTTTGAGAGTTCATACTTATAATGTTACAAAAGAAACCAAAAGCGGTTGTACTCTTTTACCTAGCAAAAACCTTGGCCTCAATGTTTCACATATGGTGTTTCAAGATGAAGGATCAAGTTTTTATACTATATATGCTAGATTGGTTCTTCCTTCTGATGAGTATAACATAACAAGGTTGAACCATGTTTGGCAAATTGGACATGCTGTTAGTGATGAAAGTCCTTTGCGCCATCCAACAAATCTTCACAATGTGGATAGCACTGAGACTATAGACTTGACTTCTCCCCGTGGTCGTAGCACGGGACAGTTCCGGAGTTTCCTTCGATCGGTACATGGAGTTCTAAGCATTATAGGGTGGGGAACAATGTTACCTATTGGAGTAATAATCCCAAGATACTTTAGAGTGTATCCTTTTAAAAGGGAACCATTGTGGTTTTACCTACACATTGGTTGCCAATTAAGTGGTTTTCTCATTGGTACTGCTGCTTTTGTTATTGGATTGGTTCTTGGACACTCATCAAGATACTATATCTTCCACACACATAGAGATTTTGGAATTCTCATATTCACTTTTAGTACAATTCAGATGTTGGCTTTTAGGTTAAAACCTAAGGCAACAGATGATTACAGGAAATATTGGAATATGTATCATCATTTTCTTGGATATGGATTATTGGCTATTATAATCATAAACATATTCAAAGGAATTGGCATTTTGAATGGAGGTGATAAATGGAAGTGGAGTTACATTGGAATTCTTATATGTTTAGGTGCCATTGCATTTGCTTTGGAGATTTTTACATGGATTAAATTTATCATGGGGAAATGGAGAGACAACCACCATGATAAAAAGACAAATTTACAGCAAAATAAATAG 1224 0.3676 MSSSSTLITYMILSFLFFVHIDGNNQPCSDKFAKLIEQRNITVCKRLRTQGAEFGWNYHNGTNSTTTLEILFGAILDTSQGWIAWGVNPGERAEMIGTKAIIGIKNPDFATTSSPPLRVHTYNVTKETKSGCTLLPSKNLGLNVSHMVFQDEGSSFYTIYARLVLPSDEYNITRLNHVWQIGHAVSDESPLRHPTNLHNVDSTETIDLTSPRGRSTGQFRSFLRSVHGVLSIIGWGTMLPIGVIIPRYFRVYPFKREPLWFYLHIGCQLSGFLIGTAAFVIGLVLGHSSRYYIFHTHRDFGILIFTFSTIQMLAFRLKPKATDDYRKYWNMYHHFLGYGLLAIIIINIFKGIGILNGGDKWKWSYIGILICLGAIAFALEIFTWIKFIMGKWRDNHHDKKTNLQQNK 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03329 407 Coils Coil 393 407 - -
Vifa1g03329 407 CDD Cyt_b561_FRRS1_like 202 381 - -
Vifa1g03329 407 ProSiteProfiles Cytochrome b561 domain profile. 191 388 IPR006593 -
Vifa1g03329 407 Pfam Protein of unknown function (DUF568) 95 208 IPR045265 -
Vifa1g03329 407 SMART 561_7 226 352 IPR006593 -
Vifa1g03329 407 PIRSF UCP037471 1 407 IPR017214 -
Vifa1g03329 407 ProSiteProfiles DOMON domain profile. 50 182 IPR005018 -
Vifa1g03329 407 Gene3D - 209 393 - -
Vifa1g03329 407 PANTHER CYTOCHROME B561 AND DOMON DOMAIN-CONTAINING PROTEIN 7 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03329 Vifa-Chr1 518597839 518599484 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03329 - - gmx:100791697 511.146
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03329 1 518597839 518599484 Vifa1g03329 1 518597839 518599484 ECH