Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03323 ATGAACAAGATTGATAAATCTCAACTTATAGTACTCTCTTTCCTAGCTTTTCTACTTGTGATCACACCCTTTCTACCTTCCTCTCTAAGGCCTAGTTATCTTTACTTAATCTTCAACATCCTTATCATTGCACTTGCTGCTCAAGCCGGATTCCTCTCAGCGTTCTCCGACAATTCAGAAGACAAAAAACATCATGTTTCCGTGTCTTCTAAGCAGAAACATACAATGCAAGAACCAAAAGAGAAGGAAGCTACAACTACAAACATAAACAGTGCAAACTCTATCTCAGAAGAACAAAAAGTTAAGAAGGCTAAGGTTGTTCAAAAATCTTCGTCTAAGAAGAAGGTTGTTTGTGTTGGTGAAAGTAAAGTTGATAAGGTGAAAAAATGTCCATCTAAGCCAAGTCTTTTTTATATAGAAGATGGAGAAGAGGATTCAGAAGTGAAAAATAATGAAGAGGTTGAAGTAGAAGATGAGATTTGTGGTGTTAATGGACAAGAACTTTTTGCAAAAGCTGAGGCTTTTATTGGAAATTTCTATAAGCAATTGAAGATGCAGAGAGAAGAGTCTTGTGTTTCTTAG 582 0.3591 MNKIDKSQLIVLSFLAFLLVITPFLPSSLRPSYLYLIFNILIIALAAQAGFLSAFSDNSEDKKHHVSVSSKQKHTMQEPKEKEATTTNINSANSISEEQKVKKAKVVQKSSSKKKVVCVGESKVDKVKKCPSKPSLFYIEDGEEDSEVKNNEEVEVEDEICGVNGQELFAKAEAFIGNFYKQLKMQREESCVS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03323 193 PANTHER OS01G0532300 PROTEIN 1 191 - -
Vifa1g03323 193 MobiDBLite consensus disorder prediction 82 97 - -
Vifa1g03323 193 MobiDBLite consensus disorder prediction 63 98 - -
Vifa1g03323 193 Pfam Cotton fibre expressed protein 166 191 IPR008480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03323 Vifa-Chr1 517801311 517801892 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03323 - - mtr:11426799 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03323 1 517801311 517801892 Vifa1g03323 1 517801311 517801892 ECH
Vifa1g03323 1 517801311 517801892 Vifa1g03323 1 517801311 517801892 PCT