Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03309 ATGTCAAACGCCGTCGTTTTGTTTCTCTTCCTTATCACAATCTCCCACTCCCACTCCGGAATAGTTCTCCCGAGTCAACACCTCCGCGACTCACTCACCTCATCGTCGTCAAGCTGCCCCGCGCCTGACCCCAATCTATACTACCGACCTGTCATCGGAATTCTCACTCACCCCGGCGACGGCGCCACCGGTCGCCTCAGCAATGCTACTGACGTTTCCAACATCCCCGCCTCTTATGTTAAATTCGTTGAAGCTGCTGGGGCTAGAGTTATTCCTCTTATCTCTACTGAGCAACCTGAGATACTTCTCAAGAAGCTTGAATTGGTAAATGGAGTTCTATTCACTGGTGGATGGGCTAAGGAAGGTTTATATTTTGAAAATGTTAAAGCAATATTTAAGAAAGCTTTAGAAAAATATGATGCCGGAGACTATTTCCCAATATATGGCATCTGCTTAGGCTTTGAACTTATATCGATGATCGTAAGCGAGGATAATAATATTCTTGAAGCATTTGGAGCAAGAAATGAGGCAAGTAGCCTTCAGTTTGTGGAGAATACAAATATAGAAGGATCTGTATTTCAAAGATTTCCTCCAGACTTGTTAAAGAAGTTGAGTACAGATTGTCTTGCCATGCAAAATCATCGTTATGGCATATCACCTTCAAAGTTCCTGAGCAATGAAAAGTTATCTAGTTTTTTCAGGATCTTGACAACTTGCACTGATGACAATGATAAGGTTTATGTTTCCACAGTACGTGCACGTAAATATCCGGTGACTGGCTTCCAATGGCATCCAGAGAAAAATGCCTTTGAATGGGGCTCAGCAAAAATTCCACACTCAGAGGATGCCATTCGGGTAACTCAGCATATTGCAAATTTTTTGGTCAGTGAAGCGAGGAAATCCTTAAACAGACCAGTTGCTCGGGAAGTGTTAGACAATCTCATTTACAATTACAAACCTACTTATGGTGGAAAGGCAGGGAAAGGATATGATGAAGTTTATCTATTTGAATAA 1014 0.4221 MSNAVVLFLFLITISHSHSGIVLPSQHLRDSLTSSSSSCPAPDPNLYYRPVIGILTHPGDGATGRLSNATDVSNIPASYVKFVEAAGARVIPLISTEQPEILLKKLELVNGVLFTGGWAKEGLYFENVKAIFKKALEKYDAGDYFPIYGICLGFELISMIVSEDNNILEAFGARNEASSLQFVENTNIEGSVFQRFPPDLLKKLSTDCLAMQNHRYGISPSKFLSNEKLSSFFRILTTCTDDNDKVYVSTVRARKYPVTGFQWHPEKNAFEWGSAKIPHSEDAIRVTQHIANFLVSEARKSLNRPVAREVLDNLIYNYKPTYGGKAGKGYDEVYLFE 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03309 337 PANTHER PROTEASE FAMILY C26 GAMMA-GLUTAMYL HYDROLASE 23 337 IPR015527 GO:0008242
Vifa1g03309 337 Gene3D - 47 337 IPR029062 -
Vifa1g03309 337 ProSiteProfiles Gamma-glutamyl hydrolase domain profile. 41 337 IPR015527 GO:0008242
Vifa1g03309 337 SUPERFAMILY Class I glutamine amidotransferase-like 49 323 IPR029062 -
Vifa1g03309 337 FunFam Folate gamma-glutamyl hydrolase 46 337 - -
Vifa1g03309 337 Pfam Peptidase C26 50 266 IPR011697 GO:0016787
Vifa1g03309 337 ProSiteProfiles Glutamine amidotransferase type 1 domain profile. 65 303 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03309 K01307 - gmx:100796947 506.523
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03309 1 515237785 515245460 Vifa1g03309 1 515237785 515245460 ECH