Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03306 ATGTCGCAAACCGAAACCCTATCTCTGATTCACGAGATTGAATCTCTCGTCTCAGATCAACTCCAAGTGGTTTCATACAAGTGGCTTAGTCGCAGTTATCTGATATCCTCTGATGAAGCAAAGAGGTTGCTTCAGGAATTTGTTCAAAAACATGAGGGTGGGTTGGAAGTGGTTTATGCTTTGTCTGGCTGGTTAAAGAGTACTCATCCTAGCTACCACATAAGGCTTGTTGCTGAGCCAAAACTTGCAGAAGCACAACAAGAGTTTGATGGGCATTGTTCGGTCCAGGTATACAGTGTGCAAGCTAGCATCCCAAAGGATCCAGCTGTGCTTTGGAATGCAGAATTCATTCAAGCAGAAGAGCTCTTCAAGCAGCCTCCCTCGGTCGATAATTGCTTGAGAGACAATAGGTTCTGTGGGATCTCTAATTCTTTTGTAAGAAGGAACGTGGAAGGCCAACCGGCAGCTTCTGCCACTCCACAAATAAAATCTTTAGCAGGCTCGGGACCAACAAAGAGTAACATTGTTCACCAACCTCCAAAGAACACAGTGCCCATTTCTATTGCTAAAGTTGATCACACATCACAGAATGTGGTGAAACAAGTCAATAGTGAAATCAACGGTACAGGAAATACAGGAGTTCATGATAACATCAATAAACCTACTGCAGAGAAAGAAAAGACCCTTCCAGTGCCCACTGGGAAAAAGAAAGGACAGGGTGATAAAAGTAGCTCTGGTACTGGAGGTTCGTTGGCAAGCTTCTGGGGTCGTCCATCTACAAAACCCAAGCCTTGCTCTGTGCCAGCAGAAAATAGTAACATGATTTCAAATCCTGCTGCTACTGAAAATGCCCAAACTTGTGCTCATGAAGCAGTAGATTGTGACAGTGGTGATGATGACAATCAAGGCGTCATCTTAAGAAGATCATCCAATAGGAAAAGGAGAGTTGTCTTTGATTACTCAGATGAAGATGAAGACATCATCAGTTTAGCGTCACCTGATGTCCCTAGTAAACAGTCGCCTCAAGATTCCATGCAAAATGACAAAAAGTCATTAGAGAAAACCACTTTGAATTTTGATTTGCAGGTAGAACATAAACCGTTGGTTAAGGAAGAGAAAGCAACTGAGAAAAAAACAACTGAGAAAAAAGTTTTCCTACCACCAAGAGAAGATTCATCAATTATGAGCAAGTGCACAAGTAATGGGAAATCATCTACTGAGAAGCTGCAGAGTAGTGCTCCTGAAATTTGTGTAAATAAGGATAGTATAAAAAAGGTCTCTCCAGGTGAACCTAAGAGGAGAAAAGTGATGAAGACCAGGATTGATGAAAAAGGGAGAGAAGTAACTGAAGTAGTCTGGGAGGGGGAGGAGACAGAGCCAAAGAAAGCTGATACGGATGCAGCAAAGAAAGCTGATACGGATGCAGCAAAGAAAGCTGATACGGATGCAGCAAAGAAAGCCGATATGGGTGCAGCAAAGAAAGCTGACAATAAAGCATCCACCAATGCTATTAACAGCGCACCGGCAACTAAGAAGCCACCAGCTACATCAAATGCTACTGGAAAAGGAGGAAGCAAGAAAGCAGTAAATTCAAAGGATCCCAAACAGGGCAACATTCTTTCATTTTTCAAGAAAGTATGA 1641 0.426 MSQTETLSLIHEIESLVSDQLQVVSYKWLSRSYLISSDEAKRLLQEFVQKHEGGLEVVYALSGWLKSTHPSYHIRLVAEPKLAEAQQEFDGHCSVQVYSVQASIPKDPAVLWNAEFIQAEELFKQPPSVDNCLRDNRFCGISNSFVRRNVEGQPAASATPQIKSLAGSGPTKSNIVHQPPKNTVPISIAKVDHTSQNVVKQVNSEINGTGNTGVHDNINKPTAEKEKTLPVPTGKKKGQGDKSSSGTGGSLASFWGRPSTKPKPCSVPAENSNMISNPAATENAQTCAHEAVDCDSGDDDNQGVILRRSSNRKRRVVFDYSDEDEDIISLASPDVPSKQSPQDSMQNDKKSLEKTTLNFDLQVEHKPLVKEEKATEKKTTEKKVFLPPREDSSIMSKCTSNGKSSTEKLQSSAPEICVNKDSIKKVSPGEPKRRKVMKTRIDEKGREVTEVVWEGEETEPKKADTDAAKKADTDAAKKADTDAAKKADMGAAKKADNKASTNAINSAPATKKPPATSNATGKGGSKKAVNSKDPKQGNILSFFKKV 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03306 546 MobiDBLite consensus disorder prediction 238 254 - -
Vifa1g03306 546 Gene3D DNA polymerase delta, p66 (Cdc27) subunit, wHTH domain 6 147 IPR041913 -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 393 417 - -
Vifa1g03306 546 PANTHER DNA POLYMERASE DELTA SUBUNIT 3 1 546 IPR019038 GO:0005634|GO:0006260|GO:0043625
Vifa1g03306 546 MobiDBLite consensus disorder prediction 204 218 - -
Vifa1g03306 546 Pfam DNA polymerase subunit Cdc27 23 495 IPR019038 GO:0005634|GO:0006260|GO:0043625
Vifa1g03306 546 MobiDBLite consensus disorder prediction 425 493 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 371 546 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 204 275 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 371 388 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 498 537 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 330 356 - -
Vifa1g03306 546 MobiDBLite consensus disorder prediction 152 181 - -
Vifa1g03306 546 FunFam DNA polymerase delta subunit 7 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03306 Vifa-Chr1 514659271 514663164 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03306 K03504 - gmx:100812372 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03306 1 514659271 514663164 Vifa1g03306 1 514659271 514663164 ECH