Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03304 ATGGGTTGTGCTGGATCCTCTCACTCCAAGCCTGATGGGACTGTAAAAAAGATCCGGATGCCTAAGCCTTGGAAGCATCCTCAGCCCATAACAAGGACTCAGCTAATACAATTGCGCGATGAGTTTTGGGATACAGCTCCTCACTATGGTGGACGGAAAGAGATTTGGGACGCTCTTCGAGCTGCTGCAGAAGCTGATCTTTCTTTGGCACAAGCAATTGTGGATAGTGCCGGGGTCATTGTCCAGAGTTCTGATTTGACAGTATGCTATGATGAAAGAGGTGCGAAGTACGAGCTACCCAAGTATGTTTTGAGTGAGCCAACTAACATGATTCGAGAAAGCTAA 345 0.4725 MGCAGSSHSKPDGTVKKIRMPKPWKHPQPITRTQLIQLRDEFWDTAPHYGGRKEIWDALRAAAEADLSLAQAIVDSAGVIVQSSDLTVCYDERGAKYELPKYVLSEPTNMIRES 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03304 114 Pfam Ubiquitin-binding domain 16 112 IPR032752 -
Vifa1g03304 114 Gene3D - 31 104 IPR038169 -
Vifa1g03304 114 PANTHER UBIQUITIN DOMAIN CONTAINING 1 PROTEIN-RELATED 1 114 IPR039869 -
Vifa1g03304 114 MobiDBLite consensus disorder prediction 1 27 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03304 - - qsu:112023216 215.698
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03304 1 514651369 514654109 Vifa1g03304 1 514651369 514654109 ECH