Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03285 ATGGCTATTATAACTTCCCACTTCGCCATTGTCAAATCCACCGTTCATTTTCCATGCATGTCAAATCAACACCGTTCTCTTAAGCCCACCGCCGTCAGAATGTCTATGAAGCAACAAAGTCGCAACTCACATCCTTATTGGGCTTCAATGCTGGCCGACATTGAAGCGCATATCAAACAATTCGTCACCATCAAAGAACCTCTCGTGGTTTTTGAGCCCATGCATCACCTTATTTTCAATGCCCCGAAAACCACCGTACCGGCTTTATGCCTAGCCGCATGCGAGCTTGTCGGCGGTGAACGTCACGAAGCTATATCCGCTGCTTCAGCTTTGTTAATAATGGAGGCAGCTACTTATACTCACGAGCATCTTCCACTCACAGATAGGCCCAAGCCCGAGTTCGGGATGAATCATGTTTATGGGCCTAACGTGGAGCTACTAGCTGTCGATGGAATAGTCCCGTTTGGATTTGAACTGTTAGCTAGATCCGACAATGGAGAAAATTCGGAGCGGATCTTGCGGGTGACGGTTGAGATCTCACGGGCTGTGGGCTCAAGAGGGGTGATAGATGCGCAGTACAGGAAAGCCATGGGTAGTAGATCGGACGGTGAGGAGATGTGCCACGTGGAAGAAATCAGGCGTGTGGTGGAGAAATATGAAGGTGGGTTGCATTCGTGTGGAGCTGTATGTGGAGGGGTGTTGGGTGGGGGACGTGAAGAGGAGATTGAGAGACTCAGGAAATTTGGGTTTTATGTTGGGATGATTCAAGGAATGGTACAAAGGGGATTCTGTGGAAGTAAAGAAGTGGATGAGGCAAGGAATTTGGCAATCAAGGAATTGGAGTTTTTTAAGGATAAAGAGGTTGATGCAATTAAAACATTCTTGAACGTTTAA 894 0.4732 MAIITSHFAIVKSTVHFPCMSNQHRSLKPTAVRMSMKQQSRNSHPYWASMLADIEAHIKQFVTIKEPLVVFEPMHHLIFNAPKTTVPALCLAACELVGGERHEAISAASALLIMEAATYTHEHLPLTDRPKPEFGMNHVYGPNVELLAVDGIVPFGFELLARSDNGENSERILRVTVEISRAVGSRGVIDAQYRKAMGSRSDGEEMCHVEEIRRVVEKYEGGLHSCGAVCGGVLGGGREEEIERLRKFGFYVGMIQGMVQRGFCGSKEVDEARNLAIKELEFFKDKEVDAIKTFLNV 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03285 297 Gene3D Farnesyl Diphosphate Synthase 39 297 IPR008949 -
Vifa1g03285 297 SUPERFAMILY Terpenoid synthases 46 255 IPR008949 -
Vifa1g03285 297 PANTHER FARNESYL DIPHOSPHATE SYNTHASE 27 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03285 Vifa-Chr1 511820068 511820961 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03285 K13789 - qsu:112000325 283.878
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03285 1 511820068 511820961 Vifa1g03285 1 511820068 511820961 ECH