Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g03217 ATGGCTTCGAAGCTACTACCATGGTTAATCACCACGTTCCTCGTGTTCCTCACGTGCCTTCAACCTTGGACTGTGAAATCACCCTTTCACCCTCGCGACTTGCTTCCTCTCATGCCCAAGCAAATTTCGTGGCCGATTCTTAATTCGCTTCATAGCGCTGTTGATCTTCTTCCTGTTTTTGTTGGTGCTGTTTCCTCTCCGGTTAATACTAATGAGTGGAAAGGTGCTTGCTTTTATAAGAATCAGGCGTGGATTGAGTTTCATAATAAAACTGGTTCCCAATTTGGTGGTGGAACCGTTCACTTAAAGGTTAGCAATGCTCATAGTTGGACATGTTTAGATATTTACATCTTTGCAACCCCATATCGTGTGACATGGGATTATTATTTTCTGGCCCGGGAGCATACACTTGAAATCAAGGAATGGGATGGGAGAGCCGAGTATGAGTATGTAAAAAATCACGGCTTATCAATTTTCCTCTTGAAAGCTGGAATGTTGGGGACCCTTCAAGCACTTTGGGAGGTCTTCCCTTTATTTACAAATACTGGATGGGGTGAGAACTCAAATATCGGGTTTCTGGAGAAACATATGGGAGCCTCTTTTGAAACACGCCCTCAGCCTTGGGTTACGAATATCAGCGCTGCTGACATTCACTCTGGGGATTTCCTTGCTGTTTCAAAAATTCGAGGTCGTTGGGGTGCTTTTGAGACTCTAGAGAAATGGGTTAGTGGTGCTTATGCTGGTCACACTGCTGTTTGCTTAAGAGATTCAGATGGAAAGCTTTGGGTTGGAGAGTCAGGACATGAAAATGAAAAGGGAGAAGATATAATTGCTATGATACCATGGGATGAGTGGTGGGATTTTGAACTGAATAAAGATGATTCTAATCCCCATATTGCTCTTCTTCCTTTACACCCTGACATTCGTGCAAGGTTTAATGAGACTGCAGCATGGGAGTATGCTTTGAGTATGGACGGAAAACCTTATGGTTACCATAACATGATTTTCAGTTGGATTGATACTTTAACTGCGAACTATCCACCTCCCTTGGATGCTAATGTGGTTGCTTGTGTTATGACAATTTGGAGTCAACTTAAACCTGAATATGCTGGAAATATGTGGAATGAAGCCTTGAACAAACGACTTGGAACTAAAGGGCTTGACCTTTCAGAAGTTTTAGTAGAAGTTGAAAGGCGTGGATCATCTTTTGATGAACTACTGACGATTCCAGAACAGGATGACTGGATCTACAATGATGGCAAGTCAACTTCTTGTGTTGCTTTTATACTTGAAATGTACAAGGAGGCAGGATTGTTTGATCCAATTGCCAGCTCTATCCAAGTGACAGAGTTTACGATAAAAGATGCTTACATTCTCAATTTTTTCGAGAACAATTCTAGCCGGTTGCCATCATGGTGCAATGACGGGGACACCGTGAAGCTTCCGTATTGTCAGATCAAAGGAAAGTATCGGATGGAGTTACCTGGATACAATACCATGCAACCATATCCTCACATGAATGAAAGGTGCTCATCTCTTCCCACAAAGTATTCCAGAGCCGAGAATTGCTAG 1572 0.4256 MASKLLPWLITTFLVFLTCLQPWTVKSPFHPRDLLPLMPKQISWPILNSLHSAVDLLPVFVGAVSSPVNTNEWKGACFYKNQAWIEFHNKTGSQFGGGTVHLKVSNAHSWTCLDIYIFATPYRVTWDYYFLAREHTLEIKEWDGRAEYEYVKNHGLSIFLLKAGMLGTLQALWEVFPLFTNTGWGENSNIGFLEKHMGASFETRPQPWVTNISAADIHSGDFLAVSKIRGRWGAFETLEKWVSGAYAGHTAVCLRDSDGKLWVGESGHENEKGEDIIAMIPWDEWWDFELNKDDSNPHIALLPLHPDIRARFNETAAWEYALSMDGKPYGYHNMIFSWIDTLTANYPPPLDANVVACVMTIWSQLKPEYAGNMWNEALNKRLGTKGLDLSEVLVEVERRGSSFDELLTIPEQDDWIYNDGKSTSCVAFILEMYKEAGLFDPIASSIQVTEFTIKDAYILNFFENNSSRLPSWCNDGDTVKLPYCQIKGKYRMELPGYNTMQPYPHMNERCSSLPTKYSRAENC 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g03217 523 Gene3D endopeptidase domain like (from Nostoc punctiforme) 211 453 - -
Vifa1g03217 523 PANTHER OS01G0793500 PROTEIN 21 523 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g03217 Vifa-Chr1 503429499 503433965 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g03217 - - gmx:100789468 992.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g03217 1 503429499 503433965 Vifa1g03217 1 503429499 503433965 ECH