Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02837 ATGGCGTCGGTTCACAGCACCGTCTATCGGCAGAGCTTCTTACCTTCAATCTCCAAAGGAAAATCAAAACCGAAGGCGCAAAACTTTCCGGCGTCGAGATTCTCCGTAAATCCGAATTTCTCGAAGAAAAAACTGGCGGTGGTAGCGACGAAACTATCGGCGAAGGAGTTCGAAGTGATAGCGGTTCAGAGCGACGATGTAACGGATCAGCAAGAAGGTTTGATGGTGAGCCGTGTGGAGAATGATGGCGGAGATGGTGAATTAACGACGCAGGTGAATGGATTTGGAGCGAATGAGGGTTTGTTATCGTTGGAAGGGTTTCCTTCTTCTTCTGGTTTGGTTGGTAATGAGAATGAGGAGAGTGTGGAGAAGCTTCTAGATAGGAGTATTAATGCTAGTATTGTTCTTGCTGCTGGTACTTTTGCTCTCACTAAGCTTCTTACCATTGATAGTGATTACTGGCATGGATGGACAATCTATGAGATAGTAAGATATGCACCTCAGCACAACTGGTCTGCTTATGAGGAAGCTCTTAAGACAAATCCAGTATTGGCGAAGATGGTGATCAGTGGGGTTGTTTATTCAGTAGGAGACTGGATTGCACAGTGCTTTGAAGGAAAACCTCTTTTCGAGTTTGATCGTGCTCGGATGTTCAGATCAGGGCTTGTTGGTTTTGCTCTACATGGTTCTCTTTCTCATTATTATTATCAGTTTTGTGAGGAGCTATTTCCTTATAAAGAATGGTGGGTAGTTCCTGTCAAAGTTGCCTTCGATCAAACTGCATGGTCGGCCGTTTGGAATAGCATTTACTATACAGTTGTGGGGCTCCTGCGTTTTGATTCTCCAATCAATATTTTCAATGAATTGACGGCAACGTTTTTTCCCATGTTGACTGCGGGATGGAAGCTGTGGCCATTTGCTCATCTAATTACTTACGGTGTAATACCAGTTGAGCAAAGACTTCTTTGGGTCGATATGATTGAGCTTATTTGGGTGACCATACTTTCAACATATTCAAATGAAAAATCAGAAGCAAGAAGTTCTTCGATGCCAATAGAAGAGATATCCACTACGTCTGAGGAGTCATGA 1089 0.4343 MASVHSTVYRQSFLPSISKGKSKPKAQNFPASRFSVNPNFSKKKLAVVATKLSAKEFEVIAVQSDDVTDQQEGLMVSRVENDGGDGELTTQVNGFGANEGLLSLEGFPSSSGLVGNENEESVEKLLDRSINASIVLAAGTFALTKLLTIDSDYWHGWTIYEIVRYAPQHNWSAYEEALKTNPVLAKMVISGVVYSVGDWIAQCFEGKPLFEFDRARMFRSGLVGFALHGSLSHYYYQFCEELFPYKEWWVVPVKVAFDQTAWSAVWNSIYYTVVGLLRFDSPINIFNELTATFFPMLTAGWKLWPFAHLITYGVIPVEQRLLWVDMIELIWVTILSTYSNEKSEARSSSMPIEEISTTSEES 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02837 362 PANTHER PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 MPV17 170 337 IPR007248 GO:0016020
Vifa1g02837 362 Pfam Mpv17 / PMP22 family 277 336 IPR007248 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02837 Vifa-Chr1 440415666 440418127 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g02837 174 344 Miscellaneous Gene Families AT2G14860 26.316 4.47e-14 69.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02837 K13348 - gmx:100805057 561.222
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02837 1 440415666 440418127 Vifa1g02837 1 440415666 440418127 ECH