Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02700 ATGGCAGTCAAACTTTACATCGTGTACTACTCCATGTACGGACATGTGGAGAAACTAGCAGAGGAAATAAAGAAAGGAGCTGCTTCTGTGGAAGGTGTTGAGCCCAAACTGTGGCAGGTACCTGAGATACTGCCAGAAGATGTGCTTGGTAAGATGAGTGCACCACCCAAGAGTGATGTACCAATCATCACCCCGAACGAACTCACTGAGGCTGATGGGTTTGTGTTTGGCTTCCCAACAAGATTTGGAATGATGGCTGCTCAATTCAAAGCTTTTCTAGACGCTACTGGTGGTTTATGGAGAACACAACAGCTCGCAGGCAAGCCTGCTGGACTCTTTTACAGCACCGGCTCTCAAGGCGGAGGCCAAGAGACTACAGCGCTTACAGCTATTACTCAGCTGGTTCATCATGGAATGATATTTGTTCCAATTGGTTATACATTCGGTGCCGGCATGTTCGAGATGGAGAAAGTGAAAGGTGGAAGTCCATATGGTGCAGGAACTTATGCGGGCGACGGCTCAAGGCAGCCGAGTGAACTTGAATTGCAGCAAGCATTCCATCAAGGGAAATATCTTGCCACCATCACAAAGAAACTCAAAGAAGATGCATAA 612 0.4739 MAVKLYIVYYSMYGHVEKLAEEIKKGAASVEGVEPKLWQVPEILPEDVLGKMSAPPKSDVPIITPNELTEADGFVFGFPTRFGMMAAQFKAFLDATGGLWRTQQLAGKPAGLFYSTGSQGGGQETTALTAITQLVHHGMIFVPIGYTFGAGMFEMEKVKGGSPYGAGTYAGDGSRQPSELELQQAFHQGKYLATITKKLKEDA 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02700 203 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 4 200 - -
Vifa1g02700 203 Gene3D - 1 201 IPR029039 -
Vifa1g02700 203 NCBIfam NAD(P)H:quinone oxidoreductase, type IV 3 199 IPR010089 GO:0003955|GO:0010181
Vifa1g02700 203 ProSiteProfiles Flavodoxin-like domain profile. 5 192 IPR008254 GO:0010181
Vifa1g02700 203 SUPERFAMILY Flavoproteins 4 200 IPR029039 -
Vifa1g02700 203 FunFam NAD(P)H dehydrogenase (Quinone) FQR1-like 1 201 - -
Vifa1g02700 203 Pfam NADPH-dependent FMN reductase 17 144 IPR005025 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02700 Vifa-Chr1 424234763 424237605 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02700 K03809 - rcu:8259333 381.719
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02700 1 424234763 424237605 Vifa1g02700 1 424234763 424237605 ECH