Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02674 ATGGTAGCTATGGCTATGGCTTCTCTTCAGAGTTCCATGACCTCTCTCTCCCTCTCCTCCAACTCTTTCTTCGGCCAGTCTCTCTCTCCCATCCCTCTCTCCCCTTTTCTTCCGGGCAAAACAACTGAGAAGAAATGTCTTATTGTAATGAAGCTTAATCGATGGGAGCGAAAGGAATGTAAACCAAACAGCCTTCCTGTGTTACACAAATTGCATGTTAAAGTTGGAGATACAGTGAAAGTCATATCTGGACATGAAAAGGGTGAAATAGGGGAGATTACTAAGGTCCTCAAACACAACAGCACTGTCATTGTTAAAGACATAAACTTGAAGACAAAGCATGTGAAAAGTAGTGAAGAGGGAAAACCAGGCGAGATAATTACGGTTGAAGCTCCTATCCACAGTTCAAATGTGATGCTTTACTCCAAAGAAAAGGATGTAGCAAGCCGCGTAGGTCATAAAGTTCTTGACAATGGTAAAAGAGTCCGCTACCTGATCAAAACTGGAGAGATAATTGATAGTGCAGAGAATTGGAAGAAACTGAAGGAAGCTAATAAGAAAACTGCTGCTACCTAG 576 0.4201 MVAMAMASLQSSMTSLSLSSNSFFGQSLSPIPLSPFLPGKTTEKKCLIVMKLNRWERKECKPNSLPVLHKLHVKVGDTVKVISGHEKGEIGEITKVLKHNSTVIVKDINLKTKHVKSSEEGKPGEIITVEAPIHSSNVMLYSKEKDVASRVGHKVLDNGKRVRYLIKTGEIIDSAENWKKLKEANKKTAAT 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02674 191 ProSitePatterns Ribosomal protein L24 signature. 76 93 IPR005825 GO:0003735|GO:0005840|GO:0006412
Vifa1g02674 191 Hamap 50S ribosomal protein L24 [rplX]. 71 167 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vifa1g02674 191 CDD KOW_RPL26 76 140 IPR041988 GO:0003723
Vifa1g02674 191 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 4 184 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vifa1g02674 191 NCBIfam 50S ribosomal protein L24 71 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vifa1g02674 191 Pfam KOW motif 75 106 IPR005824 -
Vifa1g02674 191 SUPERFAMILY Translation proteins SH3-like domain 69 171 IPR008991 -
Vifa1g02674 191 Gene3D - 66 171 IPR014722 -
Vifa1g02674 191 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 108 172 IPR003256 GO:0003735|GO:0005840|GO:0006412
Vifa1g02674 191 SMART kow_9 72 99 IPR005824 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02674 K02895 - gmx:100306643 280.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02674 1 420398788 420399871 Vifa1g02674 1 420398788 420399871 ECH