Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02655 ATGGCTCCTCTAACAAACATGCATGGAGTCTCCAAAACCATAACTCCAATTACATGTCTTCTTCCAAATGCACAAAATACCTTTAGAAAAGGACAAGTAGTTGTTGGATTTCTTGGAAGCAAAACAAAGAAATCATCAGAAAGTGACTCAATTCACACTACAAGAAGAACAGCTGCAATAAGCTTTGTTTCTCTAATTCTTACAGGACAATTCAATGAGAAGATTTCACTAGCTAAGGATAATGGATTCTGGATTGAAGGTCCTATTCCAGAACCAACAGTCACTAATAATATTGCGAATGAGAAAACGGGGACACGTTCATTTATTAAGAAGAAACTCTACATGGCGAATATTGGAGCAAAAGGAAGTGTTTTTAGGATCAAGAAATATTCATTTGATCTTCTTGCAATGGCTGATTTGATTGCACAAGACACACTCAACTATGTTAGGAGATACCTAAGACTCAAGTCTACTTTCATCTACTTCGATTTCGACAAGGTTATCTCCGCTGCTCCGGTTGATGATAAGCAACAACTCACTGACATGGCTAACAAATTGTTTGATAATTTTGAAAAGCTTGAAGAAGCTTCAAGGAACAAGAATCTAGCTGCAACACAAGCATGCTATAAGGAAACTGAAGTTATGCTTAAAGATGTCATGGACAAGATGACTATAATGTATAAAACAATTTGA 693 0.3622 MAPLTNMHGVSKTITPITCLLPNAQNTFRKGQVVVGFLGSKTKKSSESDSIHTTRRTAAISFVSLILTGQFNEKISLAKDNGFWIEGPIPEPTVTNNIANEKTGTRSFIKKKLYMANIGAKGSVFRIKKYSFDLLAMADLIAQDTLNYVRRYLRLKSTFIYFDFDKVISAAPVDDKQQLTDMANKLFDNFEKLEEASRNKNLAATQACYKETEVMLKDVMDKMTIMYKTI 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02655 230 SUPERFAMILY Oxygen-evolving enhancer protein 3, 114 223 IPR023222 -
Vifa1g02655 230 Pfam Oxygen evolving enhancer protein 3 (PsbQ) 42 223 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vifa1g02655 230 Coils Coil 176 196 - -
Vifa1g02655 230 Gene3D - 86 224 IPR023222 -
Vifa1g02655 230 PANTHER OXYGEN-EVOLVING ENHANCER PROTEIN 3-1, CHLOROPLASTIC 45 223 IPR008797 GO:0005509|GO:0009523|GO:0009654|GO:0015979|GO:0019898
Vifa1g02655 230 FunFam Photosynthetic NDH subunit of lumenal location 3, chloroplastic 86 224 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02655 K08901 - gmx:100814163 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02655 1 417948545 417949501 Vifa1g02655 1 417948545 417949501 ECH