Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02612 ATGGACGAACTACTCGTAGCCATACTCTCAATGCTTTTTCTTGCAGCACTAATCCCTCTCTATCTATGGAAGCGCCATCACGATTCTCGATCTTCCTCTTCCACCGAAGAGCCTCAACAGGCTCGTGAGAGAGAAACCGTCGTTCGTGCCACCGCTACTCGCCGCATGCGGAGAAGACCAGCTGCGTCTGGAGCTAGCACTTCGTCGGCTCAGCCTGCAGCGCAACAAGAGTCTGCGGATGAAAGCGAGAATGAAGCTGCTGGGGATGACTATGAGGCCAAAGCATCAACGAAAAAGGAAATCAAAAGGCAAGAGAGGGAAGCTCGGCGGCAGGCTGAAGAAGCTACCCGAGATTCAAAGCAGTCAAAACAGGACCGTTATTCAGAAATGCGGAGGTTGAAGGATGAAGAGCGTGAGGCACAGGAGCGTAAGTTGGAAGAGGAAGCCAAAGCTCAAAAGGCTAAGGAAGAGGAAGCTGCTGCATTTGAATTTGAGAAGTGGAAAGGCGAATTTTCAGTTGATGATGAGGGCACACTTGAAGAGGAGCAGGATAAAACTGAAGACTTGCTTGCCAATTTTGTTGAATATATAAAGAAGCACAAATGTGTTCCCTTAGAAGATCTTGCTGCAGAATTTAAATTGCGTACACAGGAATGTATCAACCGCATTGCATCTCTGGAAAGTATGGGCCGGCTTTCGGGTGTCATGGATGATAGGGGGAAATTTATTTACATCTCACAAGAAGAGATGAAAGCTGTTGCTGATTATATTAAGCGCCAAGGGAGGGTCAGCATTTCCCACTTAGCTAGTAAATCAAACCAGTTCATTGATTTAGAGCCAAAGACTCATTATAACGAGGACATAAGTAACATGGAGGAGATAAGTGTCAACTGA 894 0.4653 MDELLVAILSMLFLAALIPLYLWKRHHDSRSSSSTEEPQQARERETVVRATATRRMRRRPAASGASTSSAQPAAQQESADESENEAAGDDYEAKASTKKEIKRQEREARRQAEEATRDSKQSKQDRYSEMRRLKDEEREAQERKLEEEAKAQKAKEEEAAAFEFEKWKGEFSVDDEGTLEEEQDKTEDLLANFVEYIKKHKCVPLEDLAAEFKLRTQECINRIASLESMGRLSGVMDDRGKFIYISQEEMKAVADYIKRQGRVSISHLASKSNQFIDLEPKTHYNEDISNMEEISVN 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02612 297 SUPERFAMILY "Winged helix" DNA-binding domain 183 253 IPR036390 -
Vifa1g02612 297 SMART DDRGK_2 93 277 IPR019153 -
Vifa1g02612 297 FunFam DDRGK domain-containing protein 1 188 245 - -
Vifa1g02612 297 Coils Coil 94 158 - -
Vifa1g02612 297 MobiDBLite consensus disorder prediction 30 52 - -
Vifa1g02612 297 PANTHER DDRGK DOMAIN-CONTAINING PROTEIN 1 82 283 - -
Vifa1g02612 297 MobiDBLite consensus disorder prediction 30 157 - -
Vifa1g02612 297 MobiDBLite consensus disorder prediction 88 157 - -
Vifa1g02612 297 Pfam DDRGK domain 95 276 IPR019153 -
Vifa1g02612 297 MobiDBLite consensus disorder prediction 62 81 - -
Vifa1g02612 297 Gene3D - 188 245 IPR036388 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02612 K23344 - gmx:100810584 344.739
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02612 1 410101490 410107382 Vifa1g02612 1 410101490 410107382 ECH