Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02420 ATGGACCATCAACCAAACCCTCTTCTAAATTGGGCTTACTTCTGCCAAGGAAAGTCAATGGAAGAACTGAGACAATCACTTCTATACACAACTTTAGAGCTTGAACAAACAAGAACTCTAGCACAAGAAGAACTCACAAAAAAAGATGAACAACTAATCAACCTCAAAGATCTAATCAACAACATCATTCAAGAAAGAGATGAAGCTCAAGAGAAATGCCAAAAACTTGTCTTAGAGAATCTACTTTTCCATCAACAGAATCAGCAACAAAATGCCCCACTTTCTGGAGTTTCAAGCATTGAAGATGAACCAATCACAACAAAAAGAACAATTGACTCAAACAACAATGGTTGTTTCTCTTTGTCTTCATCAGATTGTGAAGAAAGCATTGTTTCTTCACCGCTTATCATCGACCAATCCATGATTGATAATATCCTAAGACCAACCAAACCATTGCCTGAAAAAGGTAAGCTTTTGCAGGCAGTGATGAAAGCTGGTCCTTTGCTTCAAACTCTTCTCCTTGCTGGACCACTTCCTCAATGGAAACACCCTCCTCCACCTCTTGAGTCCTTTCAGATTCCACCTGTTGCCATTCCTCAGATCCTCCATCAAGATTCTATTTTTAGTTCCAATATTGATACTACTAATGCTAATTCTCAGTGTGCAAGACTAAATAGGAAAAGGGTGTTTTTTGATGACTCTGATTCTCATCCTAATCAGAATAACTACCAAAGGGTTGTACTTCACTGA 750 0.384 MDHQPNPLLNWAYFCQGKSMEELRQSLLYTTLELEQTRTLAQEELTKKDEQLINLKDLINNIIQERDEAQEKCQKLVLENLLFHQQNQQQNAPLSGVSSIEDEPITTKRTIDSNNNGCFSLSSSDCEESIVSSPLIIDQSMIDNILRPTKPLPEKGKLLQAVMKAGPLLQTLLLAGPLPQWKHPPPPLESFQIPPVAIPQILHQDSIFSSNIDTTNANSQCARLNRKRVFFDDSDSHPNQNNYQRVVLH 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02420 249 PANTHER ENABLED-LIKE PROTEIN (DUF1635) 11 246 IPR012862 -
Vifa1g02420 249 Pfam Protein of unknown function (DUF1635) 18 246 IPR012862 -
Vifa1g02420 249 Coils Coil 48 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02420 Vifa-Chr1 388833777 388834633 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02420 - - gmx:100806513 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g02420 1 388833777 388834633 Vifa1g02420 1 388833777 388834633 ECH
Vifa1g02420 1 388833777 388834633 Vifa6g00515 6 197918932 197919838 PCT