Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g02150 ATGAATCGTAGCTTCAGAGCTTCGGAATCGCAAATGCATGCCGCGGTGACGCAGAGGCGTCACCGATTGGGGATTTCCAGATCGTCTTCGTTTTTTGTTGATAAAGATGACGAGCTTGCGTTGTTCAATCAGATGAGAAATTGCGAGGATGAGAATGATGATCTTTTGTTACAAGATTCTACCGAGGAGTTTGTTGATTCTGCATTAGGCTTAAATTCGAGGAGTTCTCCGTTATTTAACATTCCATCATCAACTGAAGCTCCTGTGCGTAAGACTGGTGCGGATGATTTTCTCAATTCTGAAACTGATAAGAATGACTATGAATGGCTTCTAACTCCTCCTGGGACTCCCCTTTTTCCTTCTTTGGAGATGGAAACTAAAAAAACTGTTATGAGTCGGCTCGGTGCTTCAACAACACGTCCCACGCCATTAAAATCTAAAATGGCAAATCCTCCACCGGAGCATAGAAGGAACAACTTGGTTTCTAAACAAGCTTCTTCTCCTGGGTTGACCGCTTCAGGGGGTGGAACCAGGAGGCCTTCATCATCAGGGAATCCAGGATCAAGACCTGCAACTCCCACGGGGCGGTCTACATTAACCACATCTTCAAAATCATCTAGACCTTCAACGCCTACTTCCCGGACATCGATACCTTCAACACCTACTTCCCGGACATCAATACCTTCAACACCTATTTCCCGGACATCGCTACCTTCGACGCCTACTTCCCGGACATTGATACCTTCGACGCCTACTTCCCGGACATTGATACCTTCAACGCCTACTTCCCGGACATCGATACTTTCAAGTAGGACAATGGTAGCTGCAGCCAAGCCCAGTGTTCCTTCTGCTAAGAGTACAGTTCCCGCCATCAAGACGACTACAGCTCCTGCAGCTAAACCCACAGTTCCTTCTAGGTCTTCAACACCCTTGTCAAGATCTACTACAAGGTCTTCAACTCCGAACAGCAGGCCTACCTTATCTAATTCCAGGCCCACCTTATCTAACTCCAGACCTGAATCAAGGGCATCGACACCTACACGGCGATCATCCACACCATCAAATGTGTCAACCATCTCTGCTCCATCAGTTAAGACTTCTTCAATACCCAAGCCAGCTCCAGCCTTGTTGAAGCAGCCAATACCGCCACGTGGAACTTCACCAACAGCGATATCAAGACCATGGAAGCCATCGGAAATGCCTGACTTTTCACTTGATGCTCCCCCCAATTTGAGGACAACACTTTCGGAAAGGTCAGTTTCAGCAACTAGGGGAAGACCTGGAGCACTGTCAGCACGCTCTTTGTCTATTGAGCCTGCTTCTAGTGGAAGACCAAAGAGGCAATCGTGCTCTCCTTCTAGAGGACGGCCCACCAACGGCATTTCTCGCACAAGTGGAAGCTCTATGCCGGCTGTTAATCGTGGATATTCCAAAGCGAATGACAAAGTCAGTCCGGTTGCAGTGGGCACCAAAATGGTTGAGCGGGTAATTAATATGAGGAAACTAGTTCCTCCTAAGATGGATGTCAAAAACTCTCCACGTAGTACTCTATCTGGCAAGCCATCTCCATCTCCAGATAGCTCCGGTTTTGGAAGAACACTCTCGAAGAAATCCTTGGATATGGCTATTAGGCATATGGATATAAGAAAAAGGGTTCCAGGCAATATGCGACCATTGACGACAAACATTCCAGCCTCTGCAATGTATAGTGTGCAGTCAGGACATCGGCGAAGCATAAATGTTAGTTTCTCGGGTTCTCCACATGCAACTAGCAGTAATGCTGGTTCTGAAATAAGTGTAAACCAAAATGGTCTTTACTCAGATAATAGTGAAATAGATTATTATGATATGGTGAGTGACAGAGGCGTTCAATCTCCGGCCAGTGTGCGGGGCAGGTACAACTACAAACCATATCATACTGAGTTTTAG 1929 0.4671 MNRSFRASESQMHAAVTQRRHRLGISRSSSFFVDKDDELALFNQMRNCEDENDDLLLQDSTEEFVDSALGLNSRSSPLFNIPSSTEAPVRKTGADDFLNSETDKNDYEWLLTPPGTPLFPSLEMETKKTVMSRLGASTTRPTPLKSKMANPPPEHRRNNLVSKQASSPGLTASGGGTRRPSSSGNPGSRPATPTGRSTLTTSSKSSRPSTPTSRTSIPSTPTSRTSIPSTPISRTSLPSTPTSRTLIPSTPTSRTLIPSTPTSRTSILSSRTMVAAAKPSVPSAKSTVPAIKTTTAPAAKPTVPSRSSTPLSRSTTRSSTPNSRPTLSNSRPTLSNSRPESRASTPTRRSSTPSNVSTISAPSVKTSSIPKPAPALLKQPIPPRGTSPTAISRPWKPSEMPDFSLDAPPNLRTTLSERSVSATRGRPGALSARSLSIEPASSGRPKRQSCSPSRGRPTNGISRTSGSSMPAVNRGYSKANDKVSPVAVGTKMVERVINMRKLVPPKMDVKNSPRSTLSGKPSPSPDSSGFGRTLSKKSLDMAIRHMDIRKRVPGNMRPLTTNIPASAMYSVQSGHRRSINVSFSGSPHATSSNAGSEISVNQNGLYSDNSEIDYYDMVSDRGVQSPASVRGRYNYKPYHTEF 642
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g02150 642 MobiDBLite consensus disorder prediction 511 534 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 129 478 - -
Vifa1g02150 642 PANTHER GASTRIC MUCIN-LIKE PROTEIN 19 612 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 131 145 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 157 273 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 435 474 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 286 367 - -
Vifa1g02150 642 MobiDBLite consensus disorder prediction 503 535 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g02150 Vifa-Chr1 344109820 344114614 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g02150 - - mtr:25494897 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa2g01672 2 436628661 436633408 Vifa1g02150 1 344109820 344114614 ECH
Vifa1g02150 1 344109820 344114614 Vifa1g02150 1 344109820 344114614 ECH
Vifa2g01672 2 436628661 436633408 Vifa1g02150 1 344109820 344114614 PCT