Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01706 ATGGCAAAAACACACCAAGTTGGAGTAGCCATGGACTTCTCTCCTACCAGCAAACTAGCTCTTAGATGGGCTGCTGATAGTCTGATCAACAAAAATGATCACATCATCATGATCATTGTTCAACCTCTCTCAGCTGATCACACCAGAAAAGAGCTTTTTGAAAACAATGGTTCACCTTTGGTGCCACTAGAGGAATTGAGGGAAATAAACTTTACCAAGCAATATGGGATTGCCAAGGATGTTGAAGTCATAGATATCCTTGAAACTGCCTCCAAAACCAAAGGGGCAAAGGTAGTTGCAAAGGTGTACTGGGGAGATCCAAGGGAGAAATTGTGTAGTGCTGTGGGAGATCTTCATTTGGACTCATTGGTTGTTGGAAGCAGGGGTTTAGGTACCACTAAAAGTGTGTTGTTAGGAAGTGTTAGCAAGCATGTGGTTACAAATGCTTCTTGCCCAGTCACTGTGGTTAAGGGAATGCAACCTTCAAAGTCTAGGAATTGA 501 0.4291 MAKTHQVGVAMDFSPTSKLALRWAADSLINKNDHIIMIIVQPLSADHTRKELFENNGSPLVPLEELREINFTKQYGIAKDVEVIDILETASKTKGAKVVAKVYWGDPREKLCSAVGDLHLDSLVVGSRGLGTTKSVLLGSVSKHVVTNASCPVTVVKGMQPSKSRN 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01706 166 Gene3D HUPs 2 166 IPR014729 -
Vifa1g01706 166 CDD USP_Like 7 156 - -
Vifa1g01706 166 PRINTS Universal stress protein signature 135 157 IPR006015 -
Vifa1g01706 166 PRINTS Universal stress protein signature 4 22 IPR006015 -
Vifa1g01706 166 PRINTS Universal stress protein signature 117 129 IPR006015 -
Vifa1g01706 166 Pfam Universal stress protein family 6 157 IPR006016 -
Vifa1g01706 166 PANTHER IMP2'P 1 160 - -
Vifa1g01706 166 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01706 Vifa-Chr1 279701630 279702436 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01706 - - gmx:100500682 266.929
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01706 1 279701630 279702436 Vifa1g01706 1 279701630 279702436 ECH