Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01588 ATGGGAGTGTTTTCCAATAAGATCGATCGAGAACAACTCAAGCCTGGTGATCATATTTACTCATGGAGACAAGCGTACATTTATGCTCATCACGGAATTTATGTTGGTGATGGAATGGTGAACCACTTCACAAGGGGAGGAGGGCAAGAAATTGGAACAGGAACTGTGTTGGACCGTTTCCTTTGCAGTTCATCACCCGCCAAAGATACCGACACTCCATGCCCAAAATGCGGTGACCAAAATAAGACTGATGGTGTCATCTCTTCCTGTTTGGATTGTTTCCTCTCTGGTGATAGTCTCTACCTTTTCGAGTATGGTGTCTCAGCTCCATATTTTCTGGCCAAAGCTCGAGGCGGTACTTGCACCCTTGCAGTTGCTGATCCAAATGAAGACGTCCTTCGCCGCGCTTCTTTTCTTCTTGAAAATGGATTTGGTGGTTACAATGTTTTCAATAATAACTGCGAAGACTTCGCAGTTTACTGCAAAACAGGTCTGCTTATATCCACAAGCATCAGTGTAGGCCGCAGCGGACAAGCAGCATCCTGCTTGGCTGCGGCTAGTACCGTGGTTTCTACACCACTTCGTTTCATGACAACCAGTTTCAGTGGTTTGGCTGCTGTTGGGTACACCATGTACTGTGTGAGTCGATTGGTTTCAGATATTGGTGTTCGCCGCGATGTTTCCAAAGTTCCCGTTGAAATGCTTGTAGCTTCACCTGACATAGATGAACCTGAGAAGATGGAAATGCTTATCGCTTCACCGGAAATTGATGCTCCCGAGAAGGTAGGAGACGTTTCCAAGGAAGATTAG 810 0.4617 MGVFSNKIDREQLKPGDHIYSWRQAYIYAHHGIYVGDGMVNHFTRGGGQEIGTGTVLDRFLCSSSPAKDTDTPCPKCGDQNKTDGVISSCLDCFLSGDSLYLFEYGVSAPYFLAKARGGTCTLAVADPNEDVLRRASFLLENGFGGYNVFNNNCEDFAVYCKTGLLISTSISVGRSGQAASCLAAASTVVSTPLRFMTTSFSGLAAVGYTMYCVSRLVSDIGVRRDVSKVPVEMLVASPDIDEPEKMEMLIASPEIDAPEKVGDVSKED 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01588 269 ProSiteProfiles LRAT domain profile. 20 170 IPR007053 -
Vifa1g01588 269 Pfam Lecithin retinol acyltransferase 12 166 IPR007053 -
Vifa1g01588 269 Gene3D endopeptidase domain like (from Nostoc punctiforme) 4 173 - -
Vifa1g01588 269 PANTHER OS05G0310600 PROTEIN 1 237 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01588 Vifa-Chr1 261937089 261938632 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01588 - - psat:127118405 502.286
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01588 1 261937089 261938632 Vifa1g01588 1 261937089 261938632 ECH