Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01185 ATGGTGTGGCCAATTCGTGAATCACTATGCATTACACGGTCAAGAATTATTGGTTCAGCTCTTCGATCAAACGCACCTTACCCAAAATTTATGAATTGGATAAAAACTGACGGTTGCCATGCAACAACATTACCTTCATTCAAGGAGAAACAACAAGAGGATCATGGTTATGAGAATATGGCTGAAATTAATGGCTACATGAATTTATTTGGTTTGATGAAACAAAGGTTCTTAAATTTCAAGAACCAAAAATACATAAAAGAATTGGAGCATTTTCAATCTCTTGCTAAAGCTCAATATCCAAAGTTTATGGTAATTGCTTGTGCAGATTCAAGAGTATGTCCCTCTAACGTATTAGGATTTCAACCCGGTGAAGTCTTTATGATACGTAACATCGCCAATCTTGTTCCTATCATGAAGAATGGAGCATCAGAGTGTAATGCTGCGCTTGAATTCGCAGTATCTACTCTTCAGGTTGAAAATATATTAGTCATTGGTCATAGTAGTTGTGCTGGGATTGAAGCTCTGATGAACATGCAAGACGATACAGAACCAAGAAGCTTCATACACAATTGGGTTGCTAATGGGAAAGTTGCCAAATTGAAGACCAAAGCTGCCACGTCTCATCTTAGCTTTGATCAACAATGTAAATTCTGTGAGAAGGAATCTATTAACCAATCTTTGTTAAACTTGCTAAGTTATCCAGGGATAGAAGATAGAGTGAGGAAGGAATTGGTCTCTATTCATGGTGGATATTATGATTTTTCCAATTGTTCGTTTGAGAAATGGACACTTGATTTTAAAGAACGCGAAAAAAACAGTTATGTTGTCAAAGAAAAAGAATTATGGTGCTGA 855 0.3649 MVWPIRESLCITRSRIIGSALRSNAPYPKFMNWIKTDGCHATTLPSFKEKQQEDHGYENMAEINGYMNLFGLMKQRFLNFKNQKYIKELEHFQSLAKAQYPKFMVIACADSRVCPSNVLGFQPGEVFMIRNIANLVPIMKNGASECNAALEFAVSTLQVENILVIGHSSCAGIEALMNMQDDTEPRSFIHNWVANGKVAKLKTKAATSHLSFDQQCKFCEKESINQSLLNLLSYPGIEDRVRKELVSIHGGYYDFSNCSFEKWTLDFKEREKNSYVVKEKELWC 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01185 284 SUPERFAMILY beta-carbonic anhydrase, cab 64 271 IPR036874 GO:0004089|GO:0008270
Vifa1g01185 284 ProSitePatterns Prokaryotic-type carbonic anhydrases signature 1. 108 115 IPR015892 GO:0004089|GO:0008270|GO:0015976
Vifa1g01185 284 PANTHER CARBONIC ANHYDRASE 59 273 IPR001765 GO:0004089|GO:0008270
Vifa1g01185 284 Gene3D Carbonic anhydrase 67 275 IPR036874 GO:0004089|GO:0008270
Vifa1g01185 284 Pfam Carbonic anhydrase 104 257 IPR001765 GO:0004089|GO:0008270
Vifa1g01185 284 FunFam Carbonic anhydrase 66 272 - -
Vifa1g01185 284 CDD beta_CA_cladeB 76 263 IPR045066 GO:0004089|GO:0008270
Vifa1g01185 284 SMART Pro_CA_2 96 264 IPR001765 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01185 Vifa-Chr1 192437661 192439672 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01185 K01673 - gmx:100812124 434.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01185 1 192437661 192439672 Vifa1g01185 1 192437661 192439672 ECH