Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01140 ATGGGGACTGCAGCACACATTGAACTTGGTGAGTTCAATCTCCAGTTGGCTGATGAAAATAAAGAATGGTTGAAAGAAAGCATTTTTGGTGTGGAATCAGATTCTGGCTCTATTATGCAGATTACAAAGGTTAGTTTGGACTGGGGCAAAAAGGACATGAAATCCTCTGAAGAAGATGGTCCAATGTCTATGCTAGGTTTATCAGTTGATGTTACTAGCATGGGAATTTATCTAACTATCAAGCGTTTAGAAACATTAATATCAACAGCAATATCCTTTCAAGCTTTAATGAAAAGTCTATCTTCAAAGAAAAAATCAACTCAAAGTCGAGGGCGTTCATCAAAATCTTCGGGTAAGGGAACTCAAATATTGAAATGCAATCTTGTACAGTGTTCAGTATATGTATTGGGGGAGACTGGATTGGAAAATACAGACGTTCTAGATCCCAAGCGAGTTAATTACGGTTCACAGGGTGGCAGAGTTATAATAGATGTGTCGGAAGATGGTACCCCACGCAGTGCAAAGATAGTGTCCACTGTTTCTGATAACTACCCAAAACTAAAGTACTGTATTTCTCTTGAAGTTGTTCAAACCAAGTTATGTTTAAACAAGGTGAAACAATCCACACAGATAGAACTTGAAAGGGCCAGATCTATCTATCAGGAATATGTGGAGGAAAGTATGCCGATGACAAATGTGGCATTATTTGATATGCAAAATACTAAATTTGTAAAACGCTTAGGTGGCCTCAAAGAAAAAGCAACTTGTTCTCTTTTCAGTGCTACTGACATTACAATAAGGTGGGAGCCTGATGTTCATCTATCACTAATTGAACTTGTTCTCCAGCTGAAACTAGTTGTACACAATAAGAAGCTCGAGGAATATGGTAGTGAATGCATGGGGGACTCATCTAATGTAAAAGATGCAAATTACAAAAATGATGCTACCATGGAATCAAGGAATCTTGAAAAGAAGAAAGGTTCTATTTTTGCTGTTGATGTGGAAAAGTTGAATATATCTGCTGAGCTAGGAGATGGAGTGGATGCTATGGTTCAGGTGCAGTCGATTTTCTCTGAGAATGCTAGTATAGGAGTGCTCTTTGAAGAATTGGTGATTAATTTTAATCAGGCCAGAATCTTGAAGAGTAGTAGGATGCAAATTTCACGAATTCCTAGTATATCTGCTAGTGCATCTGATGCAAAGGGACCCGTAACCACAACATGGGACTGGGTAATTCAAGGTCTTGATGTTCAAATTTGTTTGCCATTCAGATTGGAATTGCGTGCTATTGATGATGTTCTTGAGGACATGTTACGAGCTTTAAAGCTTATTGTGGCAGCAAAGACTAATTTGATTTTTCCTGTGAAAAAAGATAATTCTAAAGTAAAAAAACCCAGTTCAACAAAATTTGGATGCATAAAATTTTTCTTACGCAAGTTAACTGCTGACATTGAAGAGGAACCAATTCAGGGATGGCTTGATGAACACTACAAGATGTTGAAGGAGGAAGTTGGTGAGTTAGTTGTCAGGTTAAACTTTCTAGATGAGTTTGTATCGAAGGCCAAGCAAGATCCAAAATCTTCTGATGACTTGAATAATTCTTCTCAAGAGGGAAAGATTTATTTTAATGATGCTGAAGTTGATGTAAATGATTCTTCAATTATTGAGTCTATGCGAGAAGACATTTATAAACGATCATTTCGATCATATTATGAGGCATGCCAGAAGTTAGTGTTATCTGAAGGCTCAGGTGCTTGTAGGGATGGCTTTCAAGCTGGTTTCAAACCTAGTGCTTCAAGGTCTTCTCTTTTTACGATATCTGTGTTAGACTTAGATGTAAGCTTGACAAAAATTGATGGTGGAGATGATGGGATGATTGAGTTTCTGAGGAAAATTGACCCTGTTTGTCTTGAATGTGATATACCATTTTCTCGACTATATGGGGCAAATATTCTCTTGAATGCGGGTTCTCTTGTGGTTCAGATTCGAAATTACACATTTCCTCTTTTTTCTGGAAATTCTGGCAAATGTAAAGGTTGTCTTGTGTTGGCTCAGCAGGCAACTAGCTTTCAACCTCAAATACTTCAAGATGTTTATGTTGGGCGATGGAGAAAGGTGTGCTTGCTTCGATCAGCTAGTGGTACAACTCCACCCATGAAGACATTCTTAGATTTACCATTACATTTTCAAAGAGGCGAAGTGTCATTTGGGGTGGGTTATGAACCAGTTTTTGCTGATCTTAGTTATGCTTTCACCGTGGTGCTACGGAGGGCTAATCTAAGTATTAGGAATCCTGGCCCACTTATATTGCCACCAAAAAAGGAGAAGAGTTTGCCATGGTGGGATGACATGAGAAATTACATTCATGGAAATATTTCCTTATTATTTTCTGAAACTAGATGGTATATTTTGGCATCTGCAGATCCTTATGAAAAGCTTGATAAACTTCAAATTGTGACTAGCTCTTTGGAAATTCACCAGTCAGATGGTCGTATTCTCGTTTCTTCCAAAGATTTCAAGATTTTTTTGAGTAGTTTGGAAAGTTTGGCAAACAAACGTGGATCTAAAGTTCCAGCTGGTGTCAATAGTCCATTTTTGGAAGCCCCAGTCCTTACAACTGAAGTTACAATGGACTGGGGTTGTGACTCTGGACAACCCTTGAATCATTATTTATTTGCACTTCCAATTGAAGGAAAGGCTCGTGAAATAATGTTTGATCCCTTCAGATCCACTTCTCTTTCCATTCGATGGACCCTATCTTTTGGATCTGTTCGTCCTCTGTCAGAAAAGAAACATCCATCCTCCATAGCAGTAAATAGTACAGAAGCAGATGCTAATGTCTCTCATCCTCCTAACATTTGTCAGAATGTTTTACCTGTTTCCCCAACAATAAAACTCGGTGCTCATGATCTAGCTTGGATTGTAAGATTCTCGAACTTGAACTACCTTCCTCCACATAAACTGCGCATGTTCTCACGATGGCCTCGTTTTGGAGTTCCTAGAATTGTCAGATCAGGTAATCTTTCACTTGATAAAGTGATGACTGAATTTATGATGCGTATAGATTCCACTCCAATCTGCATAAAGAACATGCCATTACATGATGATGATCCAGCTAAAGGACTGACCTTCATGATGACAAAGCTCAAGCTTGAATTATATTTTAGTCGGGGACAGGAAAATTATACTTTTGAATGTAAACGCGAACTTCTTGATCTTGTTTACCAAAGTATTGACCTTCATAGGCCCAAGTGTTTCCTAAATAAAGAAGAGTGTGGAACTGTTGCTAAATCAGTTAATGTGATACCAAAAAGCTCACAATCTGCATCCGAGGAAAAAACTCCCTCTGAAAAGGGTTATCTGGCACAGAAAAATCACGACGACGGATTTCTGTTATCTTGTGATTACTTTACCATACGAAAACAGTCTCCAAAGGCTGATCCTGCTACGTTATTAGCCTGGCAAGAAGCCGGAAGAAGAAATGTTGAGAAGACTTATGTACAGTCTAACTGTGAAAAACAGAGCGAAACAGATGAGCATATGCAATCAGACCCAAGCGATGATGATGAGTACAGTGTGGGGATAGAGGATGATGGGTATAATGTGGTAATAGCTGACAATTGTCGGCGTGTGTTTGTCTATGGTCTAAAGCTTTTGTGGAATATTGAAAACAGAAATGCAGTTTGTTTTTGGGCTGGCGGTCTAGCCAAAGCTGCTGCACCTGCCAAGCCTTCTCCTTCCCGGCAGTATGCACAGAGAAAATTACACGAGAACAACATCCAGCAAGATGGAACTGAAACTCGTCAAGATGATGCATGTGAAACTCATGAAGACGACGAAACTGAAATGCACAGAGAGGATGGGGCTGAAACCCATAAAGATGAAGAAGTTGAAACCCATAAAGAGGAAGGAGTTGAAACCCATCAAGATGAAGTTGGTAAGTCCCTTCCCACCGGTAACAACTTTGATTCGCCCTCTTCTCTGGCTGCCCAGACTTCTGAATTCCCTTCATTCCCATCCATGGACAGCTTACCATCAGCCAAATATGAAAATAAAGACGAGGAGGGGACTCGACACTTCATGGTTAATGTTATTGAACCACAATTTAATCTTCACTCAGAGGGTGCAAATGGTAGGTTTTTGCTTGCTGCTGTAAGTGGACGTGTTTTAGCCCAGTCGTTTCATTCAGTTCTTCATGTTGGCCATGACATGATTGAGCAAGCACTTGGTACAACAGATGAAAATATTAGTGAATACCAGCCTGAAATTGCATGGAAACGAATGGAGTTGTCTGTTATGTTGGAGCATGTTCAAGCGCATGTAGCCCCAACAGATGTTGATCTAGGGGCTGGGGTGCAGTGGCTACCAAAAATTATTAAAGGCTCTCCAAAAGTAACGCGTACAGGTGCACTTCTTGAAAGAGTTTTTATGCCTTGTGACATGTACTTTCAGTACACAAGGCACAAAGGGGGCACTCCAGAAGTGAAGGTAAAGCCCTTGAAGGAGCTCAAGTTCAATTCTCATAATATTACAGCAGCAATGACATCTCGCCAGTTTCAAGTCATGTTGGACGTGTTAAACAATCTTCTATTTGCACGGCTTCCAAAGCCTCCAAAAAGTAGCCTGACACTTCCAAATGAAGATGATGAAGATGTTGAAGAGGAAGCAGATGAGGTGGTTCCTGATGGTATTGAAGAGGTGGAACTTGCAAAAATCAACCTTGAAAAGAAAGAAAGGGAACAAAAGTTGCTTCTTGATGATATGAAAAAGTTGTCTTTTTTGTGTGACCCTTCCAAAGATCCACATCCAGAAAAGGAACCGGACTTGTGGATGATAGATGGTGGAATAGCCATGCTGGTCCAAGGATTGAAGAGAGAACTTTTAAGTGCTCAAAAATCCAGGAAGGAAGCATATGCATCATTAAGAATGGCCATGCAAAAAGCTGCACAGGCAAGGCTAATGGAGAAGGAGAAGAACAAAAGTCCTTCCCATGCTATGCGCATATTTTTGCAAATTAACAAAGTTGTTTGGAGCATGCTTCTTGATGGTAAATCCTTTGCTGAAGCCGAAATCAATGACATGATCTACGAGTTCGATCGGGATTATAAGGATGTGGGTGTTTCTCAGTTTACAACCAAATATCTTGTTTTCAAAAACTGTCTTCCCAATGCCAAATCTGATACGATTTTGTCAGCATGGAATCCTCCAGCCGAATGGGGAAAAAAAGTCATGCTTCGAGTTGATGCGAGACAGGGAGCTCCAAAGGATGGAAGTTCTCCCTTTGAACTTTTCCAGGTAGAAATATATCCGCTTAAGATCCATTTGCAAGAGACAATGTACAGAATGATGTGGGGGTATTTCTTCCCAGAGGAAGATCGAGTTTCACAACGCCGACAGGAAGTTTGGAAGGTCTCAACCACAGCTGGTGCAAGGCGTGTTAAAAAAGGTTCTTCAGCCAGTGAAGCTTCCACCTCAAGCAATCCGTCGACAAAGGAGTCTGAGGCCTCCTCCAAATCTTCCTTCTCTTCATTTCTATTTTCTACAACCAATCAGTCTTCTGCCCAAGCTGGTTCTGCACAGGCATCCAAAGCACAAAATGTCAAAGTAGCTCCTGGTACTGGTTCAACCCCTGAGTTGAAAAAGTCATCTTCTTTTGATAAATCATGGGAGGAGACCGTGGCAGAATCTGTAGCTGATGAATTCGTCTTACAAAGTTTAGCTAAAAATGGCCCATTTGACTCTACTGAGCAGCAAGATGAAGCTTCCAAGAGTAAATCAAAAGATCCGAAAGGTGTAAAAGCTGGTCAATCATCTATTGAAGAAAAGAAGGTGGCTAAGCCACAAAAGATAATGGAATTTCACAACATTAAAATTAGTCAGGTGGAATTGTGTGTTACGTATGAAGGGCAACGATTTGTCGTAAATGATATGAAATTACTGATGGATCAATTTCACCGAGCCGAGTTTACCGGGACTTGGCGAAGACTCTTCTCACGGGTTAAGAAGCATATCATTTGGGGAGTCCTAAAGTCTGTGACTGGCATGCAGGGGAAGAAATTTAAAGACAAAGGTCAGAATCAGCCAAGTGGAGCCATTGTTCCGGAAATTGATCTTATTGTTAGTGACACTGAAGGCCATGCAGGAAAACCTGATAAGCTTCCACCATCATGGCCTAAGCGCCCTACTGATGGAGCAGGCGATGGATTTGTAACATCTGTTAAAGGTCTATTTAACACCCAACGCCGTAAGGCAAAGGCATTTGTGCTTAAGACAATGAAAAATGAAGCAGAAAATGAAGCTCAAGGAGATTGGGGTGAAAATGATGTAGAGACTTCTCATTTTGCTAGACAGCTCACGATAATGAAAGCTAAAAAACTTCTTAAGCGGCACACTAAGAAGTACGACAAAGAAGAGAAAGGTTCGCCCGCAACGACCGCAATTCAAAAAGAAGAATTACAATCGTCATCTCCAAAAGAGGAAGCTATATATGACAGTGATTCGTCAAGTGGATCCTCCTCATCCTATGAAGCTTTTCTTGAATAG 6543 0.4042 MGTAAHIELGEFNLQLADENKEWLKESIFGVESDSGSIMQITKVSLDWGKKDMKSSEEDGPMSMLGLSVDVTSMGIYLTIKRLETLISTAISFQALMKSLSSKKKSTQSRGRSSKSSGKGTQILKCNLVQCSVYVLGETGLENTDVLDPKRVNYGSQGGRVIIDVSEDGTPRSAKIVSTVSDNYPKLKYCISLEVVQTKLCLNKVKQSTQIELERARSIYQEYVEESMPMTNVALFDMQNTKFVKRLGGLKEKATCSLFSATDITIRWEPDVHLSLIELVLQLKLVVHNKKLEEYGSECMGDSSNVKDANYKNDATMESRNLEKKKGSIFAVDVEKLNISAELGDGVDAMVQVQSIFSENASIGVLFEELVINFNQARILKSSRMQISRIPSISASASDAKGPVTTTWDWVIQGLDVQICLPFRLELRAIDDVLEDMLRALKLIVAAKTNLIFPVKKDNSKVKKPSSTKFGCIKFFLRKLTADIEEEPIQGWLDEHYKMLKEEVGELVVRLNFLDEFVSKAKQDPKSSDDLNNSSQEGKIYFNDAEVDVNDSSIIESMREDIYKRSFRSYYEACQKLVLSEGSGACRDGFQAGFKPSASRSSLFTISVLDLDVSLTKIDGGDDGMIEFLRKIDPVCLECDIPFSRLYGANILLNAGSLVVQIRNYTFPLFSGNSGKCKGCLVLAQQATSFQPQILQDVYVGRWRKVCLLRSASGTTPPMKTFLDLPLHFQRGEVSFGVGYEPVFADLSYAFTVVLRRANLSIRNPGPLILPPKKEKSLPWWDDMRNYIHGNISLLFSETRWYILASADPYEKLDKLQIVTSSLEIHQSDGRILVSSKDFKIFLSSLESLANKRGSKVPAGVNSPFLEAPVLTTEVTMDWGCDSGQPLNHYLFALPIEGKAREIMFDPFRSTSLSIRWTLSFGSVRPLSEKKHPSSIAVNSTEADANVSHPPNICQNVLPVSPTIKLGAHDLAWIVRFSNLNYLPPHKLRMFSRWPRFGVPRIVRSGNLSLDKVMTEFMMRIDSTPICIKNMPLHDDDPAKGLTFMMTKLKLELYFSRGQENYTFECKRELLDLVYQSIDLHRPKCFLNKEECGTVAKSVNVIPKSSQSASEEKTPSEKGYLAQKNHDDGFLLSCDYFTIRKQSPKADPATLLAWQEAGRRNVEKTYVQSNCEKQSETDEHMQSDPSDDDEYSVGIEDDGYNVVIADNCRRVFVYGLKLLWNIENRNAVCFWAGGLAKAAAPAKPSPSRQYAQRKLHENNIQQDGTETRQDDACETHEDDETEMHREDGAETHKDEEVETHKEEGVETHQDEVGKSLPTGNNFDSPSSLAAQTSEFPSFPSMDSLPSAKYENKDEEGTRHFMVNVIEPQFNLHSEGANGRFLLAAVSGRVLAQSFHSVLHVGHDMIEQALGTTDENISEYQPEIAWKRMELSVMLEHVQAHVAPTDVDLGAGVQWLPKIIKGSPKVTRTGALLERVFMPCDMYFQYTRHKGGTPEVKVKPLKELKFNSHNITAAMTSRQFQVMLDVLNNLLFARLPKPPKSSLTLPNEDDEDVEEEADEVVPDGIEEVELAKINLEKKEREQKLLLDDMKKLSFLCDPSKDPHPEKEPDLWMIDGGIAMLVQGLKRELLSAQKSRKEAYASLRMAMQKAAQARLMEKEKNKSPSHAMRIFLQINKVVWSMLLDGKSFAEAEINDMIYEFDRDYKDVGVSQFTTKYLVFKNCLPNAKSDTILSAWNPPAEWGKKVMLRVDARQGAPKDGSSPFELFQVEIYPLKIHLQETMYRMMWGYFFPEEDRVSQRRQEVWKVSTTAGARRVKKGSSASEASTSSNPSTKESEASSKSSFSSFLFSTTNQSSAQAGSAQASKAQNVKVAPGTGSTPELKKSSSFDKSWEETVAESVADEFVLQSLAKNGPFDSTEQQDEASKSKSKDPKGVKAGQSSIEEKKVAKPQKIMEFHNIKISQVELCVTYEGQRFVVNDMKLLMDQFHRAEFTGTWRRLFSRVKKHIIWGVLKSVTGMQGKKFKDKGQNQPSGAIVPEIDLIVSDTEGHAGKPDKLPPSWPKRPTDGAGDGFVTSVKGLFNTQRRKAKAFVLKTMKNEAENEAQGDWGENDVETSHFARQLTIMKAKKLLKRHTKKYDKEEKGSPATTAIQKEELQSSSPKEEAIYDSDSSSGSSSSYEAFLE 2180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1169 1194 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1313 1340 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 2146 2180 - -
Vifa1g01140 2180 Coils Coil 206 226 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1259 1310 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 2130 2180 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1856 1882 - -
Vifa1g01140 2180 Coils Coil 1567 1587 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1909 1940 - -
Vifa1g01140 2180 Pfam Golgi-body localisation protein domain 1475 2011 IPR019443 -
Vifa1g01140 2180 PANTHER ANTIGEN MLAA-22-RELATED 2 2130 IPR045167 -
Vifa1g01140 2180 SMART Fmp27_GFWDK_2 664 812 IPR019441 -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 2043 2065 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1812 1835 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1918 1940 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1856 1886 - -
Vifa1g01140 2180 MobiDBLite consensus disorder prediction 1257 1352 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01140 Vifa-Chr1 187181306 187199937 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01140 - - cam:101507025 3480.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01140 1 187181306 187199937 Vifa1g01140 1 187181306 187199937 ECH
Vifa1g01140 1 187181306 187199937 Vifa2g03481 2 1006599112 1006632708 PCT