Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01134 ATGGTTATTTTTCTTCTCTCTTTGAGGCTCACCGATATCCCACAATTCTCATTGGTAAAAATCTTAATGAATACTCGTGAGGCATGTATGAATGCACTCATGGAAGCTACAATGAATAGCGGTAGGAGAAAGCGGAGCGGGGTGGTAGATCGACGGTATAAAAAAGAGAAGCACTTTCAGAAGAAGAAACACAAGAACGCTACTCCAAAGACTCTAACGTTGCTTCCGATTCATCGTGATTTTCAAGGTAGAATGGCGACGTTCGAACTTTACCGTAGGTCTACGATTGGAATGTGCCTCACCGAGACTTTGGATGAGATGGTTCAGAATGGAACTCTTAGTCCTGAGCTTGCTATTCAGGTTCTGGTTCAGTTTGATAAGTCTATGACTGAGGCTCTGGAAACTAAAGTTAAGAGCAAGGTTTCTATCAAGGGACATCTCCATACATACAGATTTTGTGATAATGTTTGGACTTTCATCTTACAAGATGCTTTGTTGAAGAATGAAGACAGCCAAGAGAATGTTGGACGGGTTAAAATAGTGGCATGTGACTCAAAGTTGCTCAGTCAGTAA 573 0.4136 MVIFLLSLRLTDIPQFSLVKILMNTREACMNALMEATMNSGRRKRSGVVDRRYKKEKHFQKKKHKNATPKTLTLLPIHRDFQGRMATFELYRRSTIGMCLTETLDEMVQNGTLSPELAIQVLVQFDKSMTEALETKVKSKVSIKGHLHTYRFCDNVWTFILQDALLKNEDSQENVGRVKIVACDSKLLSQ 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01134 190 MobiDBLite consensus disorder prediction 47 62 - -
Vifa1g01134 190 FunFam Transcription initiation factor IIA subunit 2 139 190 - -
Vifa1g01134 190 MobiDBLite consensus disorder prediction 41 62 - -
Vifa1g01134 190 PANTHER TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2 85 190 IPR003194 GO:0005672|GO:0006367
Vifa1g01134 190 Gene3D - 139 189 IPR009088 GO:0005672|GO:0006367
Vifa1g01134 190 CDD TFIIA_gamma_C 141 186 IPR015871 GO:0005672|GO:0006367
Vifa1g01134 190 Pfam Transcription initiation factor IIA, gamma subunit, helical domain 88 133 IPR015872 GO:0005672|GO:0006367
Vifa1g01134 190 SUPERFAMILY Transcription factor IIA (TFIIA), beta-barrel domain 136 186 IPR009088 GO:0005672|GO:0006367
Vifa1g01134 190 Pfam Transcription initiation factor IIA, gamma subunit 144 185 IPR015871 GO:0005672|GO:0006367
Vifa1g01134 190 Gene3D - 87 138 IPR009083 GO:0005672|GO:0006367
Vifa1g01134 190 CDD TFIIA_gamma_N 88 135 IPR015872 GO:0005672|GO:0006367
Vifa1g01134 190 FunFam Transcription initiation factor IIA subunit 2 86 138 - -
Vifa1g01134 190 SUPERFAMILY Transcription factor IIA (TFIIA), alpha-helical domain 88 138 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01134 K03123 - fve:101306952 208.764
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01134 1 185774493 185779779 Vifa1g01134 1 185774493 185779779 ECH