Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01129 ATGGAAACTGTGTTGGATCAAGCTACTATCATTTGTTCTCACTGTGATCGAGCTATTCCTGTTGCAAATGTTGACTTGCATAATGCTCATTGTTCAAGGAACCTTCAAAAGTGCAAAGTTTGTGGTGATATGATTGCCAAAAAGAATGCTGAGGATCACTATTTAACAACTCATGCACCAGTTTCTTGTTCATTGTGCAGTGAGACAATGGATCGTGATATTATTAATATCCATGAAGGTGAAAAATGCCCTAAAAGGATTGTCACTTGTGACTTCTGTGAATTCCCATTGCCAGCAGTTGATCTAGCTGAGCATCAGGAAGTATGCGGAAATCGAACAGAACTGTGCCACCTTTGTAACAAATATGTTAGACTTCGTGAAAGATGCAATCATGAAGCCAGTTGCAATGGCATCATTCAAGATATAGCTATCGGCTCTTCAAGGAATATGATGCAAGCTGAAAGAAACGAACGTGTTCAACGAAGGCAGCGGCGGCGGCCGCAGAATGACTTCTCAACTAAACGTCTTCTTTTCTCAATAGCCATCACTGGCATTGCTGTTATGCTTGGATCTTTTTACCTACAGAGAAAGGCAGATTCAAGTGAGGTGCATTAG 615 0.4114 METVLDQATIICSHCDRAIPVANVDLHNAHCSRNLQKCKVCGDMIAKKNAEDHYLTTHAPVSCSLCSETMDRDIINIHEGEKCPKRIVTCDFCEFPLPAVDLAEHQEVCGNRTELCHLCNKYVRLRERCNHEASCNGIIQDIAIGSSRNMMQAERNERVQRRQRRRPQNDFSTKRLLFSIAITGIAVMLGSFYLQRKADSSEVH 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01129 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 112 IPR013083 -
Vifa1g01129 204 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 7 199 - -
Vifa1g01129 204 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 5 57 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01129 Vifa-Chr1 185097835 185100737 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01129 - - gmx:100527695 333.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01129 1 185097835 185100737 Vifa1g01129 1 185097835 185100737 ECH