Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g01105 ATGGATACTGCAGCAGGTCCAAGTCTCTATCCATTGCATCAGAGCAAAACTATTCACCTGGTTAGGCATGCCCAAGGGGTTCATAATGTAGAAGGAGAAAAGAACCATGATGCTTACTTATCTTATGATTATTTTGATGCAAACCTAACCCCTCTTGGATGGAAGCAGGTTGAAAATCTGCAAAAGCATGTGAAGGCTAATGAACTTCCCAGAAAAATTGAACTAGTTGTGGTTTCCCCATTGTTAAGGACAATGCAAACAGCTGTTGGAGTCTTTGGTGGGGAAGCATACACTGATGGAATTAATGAACCTCCTCTGATGATTGAAAATGTGGGACACAGTGATCATCCTGCTGTTTCTTCTCTGAACTGCCCACCATTTATTGCAGTAGAGCTTTGCCGGGAGCAAATGGGACTCCATCCTTGTGATAAGAGAAGAACTGTCACCGAGTACCAACACATGTTTCCCGGAATTGATTTTTCATTGATTGAAACCGACGAGGACACTTGGTGGAAACCTGAAAGAGAGATGAAAGAAGAAGTTACTGGTAGAGGACTCAAGTTTTTGGAATGGTTGTGCACACTTAAAGAGAAGGAGATAGCTGTTGTTACCCATAGCAGTTTTCTGTTTAATACCCTCAGTGCTTTTGGAAATGACTGTCACCCAAATATTAAGACTGAAATGTGCAAACGCTTTGCTAATTGTGAACTACGCTCCATGGTTATTGTTGATAAAGGTATGATTGGATCTAATAATTCAACCACCAACTATCCTGGCAAAATTCCTCATGGTCTGGATCTTCCTAGTGATGCTACTGACTAA 822 0.4136 MDTAAGPSLYPLHQSKTIHLVRHAQGVHNVEGEKNHDAYLSYDYFDANLTPLGWKQVENLQKHVKANELPRKIELVVVSPLLRTMQTAVGVFGGEAYTDGINEPPLMIENVGHSDHPAVSSLNCPPFIAVELCREQMGLHPCDKRRTVTEYQHMFPGIDFSLIETDEDTWWKPEREMKEEVTGRGLKFLEWLCTLKEKEIAVVTHSSFLFNTLSAFGNDCHPNIKTEMCKRFANCELRSMVIVDKGMIGSNNSTTNYPGKIPHGLDLPSDATD 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g01105 273 Pfam Histidine phosphatase superfamily (branch 1) 18 90 IPR013078 -
Vifa1g01105 273 SMART PGAM_5 17 212 IPR013078 -
Vifa1g01105 273 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 12 245 - -
Vifa1g01105 273 Gene3D - 16 258 IPR029033 -
Vifa1g01105 273 SUPERFAMILY Phosphoglycerate mutase-like 16 248 IPR029033 -
Vifa1g01105 273 CDD HP_PGM_like 17 88 IPR013078 -
Vifa1g01105 273 FunFam Phosphoglycerate mutase-like protein 1 12 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g01105 Vifa-Chr1 181130608 181135635 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g01105 - - mtr:11425342 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g01105 1 181130608 181135635 Vifa1g01105 1 181130608 181135635 ECH