Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00792 ATGAAAGAAAACCATCCTCCAACAACAACACCAGATCTACAACCAAGAGGCGAGATCGCCGAATCCTCCACCTCAAAAAACCGAACCGGTTCATCCGAACCATTCCCCGGTTCACCCCTCACCGAAAACCCCTCCCCCTTCCCCGACCAAGTCCTCGAGAACGTCCTCGAGAACGTCCTCCACTTCCTCTCCTCCCGCCAAGACCGCAACGCCGCCTCATTGGTCTGCCGTTCATGGTACCGCGCCGAAGCCCTCACTCGATCCGACCTCTTCATCGGAAACTGCTACGCTCTCTCCCCCCGCCGCGCTACCGCCCGCTTCAGCCGCATCAAGTCGGTAACCGTTAAGGGGAAGCCCAGGTTTGCGGATTTCGATCTGATGCCGGTTGATTGGGGGGCCCACTTCACTCCTTGGGTTACTTCACTTGCTCGGGCTTACCCTTGGCTTGAAAAGCTTCATCTGAAACGTATGTCTGTTACCGATAAAGATCTCGGTATCATCGCCGATTCGTTCCCGGGTTTTCGCGAGCTTTTGCTTGTTTGCTGTGAAGGATTTGGTACCCCTGGTCTTGCTGTTATTGCTTCTAAGTGCAGACTGTTGAGGGTGCTGGAGCTGGTGGAATCTGTGATTGAGGTTGAGGATGATGTTGAGGTGGATTGGGTATCTTGTTTTCCGAGTGAGGGACAAACTCATTTGGAGTCTCTTGCTTTTGATTGTGTTGAGTGTCCTGTGAATTTTGAGGCATTGGAAGGGCTGGTGGCTAGATCGCCTGGTTTGAAGAAGCTTAGATTGAACAGATCTGTTTCAATGGTTCAGCTTCATCGGCTCATGCTTCGTGCTCCTCAGCTCACACATCTTGGAACGGGTTCGTTCAGTGCTAATGAGAATGTTGATCAAGAGCCTGATTATGCATCTGCTTTTGCAGCTTGCAGATCGTTGGTTTGTTTGTCTGGATTTAGGGAGATTTGGCCGGATTACCTTCCTGCTATTTATCCGGTTTGCTCGAACCTTACTTCGTTGAATTTTAGTTATGCTGATGTTAATGCGGAACAGCTGAAGTCTGTTATATGTCACTGTCATAAGCTGCAGATATTGTGGGTCCTTGATTCGATAGGCGATGAAGGCCTTCAGGCAGTGGCTGCAACTTGCAACGACTTGCGTGAGCTTCGAGTTTTTCCTGTGGATGCGAGGGAGGAAGCTGAAGGTCCTGTTTCTCAGGTTGGTTTCGAAGCCATTTCGATGGGTTGTAGAAAATTAGAATCGATTTTGTTTTTCTGCCAGACGATGACGAACGCAGCTGTGGTTGCAATGTCAAAGAACTGTCCAAATCTTGTGGTGTTTCGTCTTTGTATAATTGGGGTGTATCGTCCCGATGCTGTGACACAAGAACCCATGGATGAGGGTTTTGGTGCTATCGTTATGAACTGCAAGAAGCTCACCCGGCTTGCTGTATCTGGTCTGCTGACTGATCGGGCTTTTGAATACATCGGAAGGGATAGTCCATTTGGAGACGCAGCTTTGCGATCCGGTTTGCATCATTACTATAACATGAGGTTCCTTTGGATGTCGTCCTGTAAATTGACACGTCAAGCTTGCCAAGAAGTTGCACGGGCATTGCCTCACATGGTTTTGGAAGTTATCAACAATGGCGAAGATGCAGTAGAGGATATTGGAATACTGTACATGTATCGGTCTCTTGATGGGCCGCGAGATGATGCTCCAGAAAATGTTACCATTCTACATTAG 1746 0.4897 MKENHPPTTTPDLQPRGEIAESSTSKNRTGSSEPFPGSPLTENPSPFPDQVLENVLENVLHFLSSRQDRNAASLVCRSWYRAEALTRSDLFIGNCYALSPRRATARFSRIKSVTVKGKPRFADFDLMPVDWGAHFTPWVTSLARAYPWLEKLHLKRMSVTDKDLGIIADSFPGFRELLLVCCEGFGTPGLAVIASKCRLLRVLELVESVIEVEDDVEVDWVSCFPSEGQTHLESLAFDCVECPVNFEALEGLVARSPGLKKLRLNRSVSMVQLHRLMLRAPQLTHLGTGSFSANENVDQEPDYASAFAACRSLVCLSGFREIWPDYLPAIYPVCSNLTSLNFSYADVNAEQLKSVICHCHKLQILWVLDSIGDEGLQAVAATCNDLRELRVFPVDAREEAEGPVSQVGFEAISMGCRKLESILFFCQTMTNAAVVAMSKNCPNLVVFRLCIIGVYRPDAVTQEPMDEGFGAIVMNCKKLTRLAVSGLLTDRAFEYIGRDSPFGDAALRSGLHHYYNMRFLWMSSCKLTRQACQEVARALPHMVLEVINNGEDAVEDIGILYMYRSLDGPRDDAPENVTILH 581
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00792 581 MobiDBLite consensus disorder prediction 7 48 - -
Vifa1g00792 581 Gene3D Ribonuclease Inhibitor 89 580 IPR032675 -
Vifa1g00792 581 Gene3D - 45 87 - -
Vifa1g00792 581 FunFam Transport inhibitor response 1-like protein 42 87 - -
Vifa1g00792 581 CDD F-box_AtTIR1-like 49 87 - -
Vifa1g00792 581 SUPERFAMILY F-box domain 47 82 IPR036047 GO:0005515
Vifa1g00792 581 MobiDBLite consensus disorder prediction 1 48 - -
Vifa1g00792 581 Pfam F-box 49 88 IPR041567 -
Vifa1g00792 581 Pfam Transport inhibitor response 1 protein domain 109 154 IPR041101 -
Vifa1g00792 581 PANTHER F-BOX/TPR REPEAT PROTEIN POF3 128 542 - -
Vifa1g00792 581 SUPERFAMILY RNI-like 73 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00792 Vifa-Chr1 133142012 133144349 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00792 - - gmx:100807836 904.049
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00792 1 133142012 133144349 Vifa1g00792 1 133142012 133144349 ECH