Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00789 ATGTTCAATCAAGAGAAACTCATGCATTACCAAGTAGAACAACCATCATGGAGCTACTACATGACAAGAGTAAGAACTCGAACAACGGAAGAAGATCAAATGGAGAGAATCATGAGATTAGCTACACAAAGTGCTGTTGTGATATTCAGCATTAGTAGTACTAGTTGTATGTGTCATGCAATGAATAGTTTGTTTAGTGGAATGGGAGTGAATGCATTGGTTCATGAACTTGATCAAGATACAAAACCATTCATGAGGTTACTTGGAAATTCAACATCACTGCCTGTTGTTTTCATTGGTGGGAAACTAGTTGGTTCAATGGATACAGTTTTGGCTTTTCATATCAATGGTTCTCTTGTTCCTCTTCTCAAACATGCTGGTGCTTTATGGCTTTAA 396 0.3737 MFNQEKLMHYQVEQPSWSYYMTRVRTRTTEEDQMERIMRLATQSAVVIFSISSTSCMCHAMNSLFSGMGVNALVHELDQDTKPFMRLLGNSTSLPVVFIGGKLVGSMDTVLAFHINGSLVPLLKHAGALWL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00789 131 Pfam Glutaredoxin 46 104 IPR002109 -
Vifa1g00789 131 ProSiteProfiles Glutaredoxin domain profile. 34 130 - -
Vifa1g00789 131 NCBIfam glutaredoxin-like family 38 131 IPR011905 -
Vifa1g00789 131 SUPERFAMILY Thioredoxin-like 32 130 IPR036249 -
Vifa1g00789 131 Gene3D Glutaredoxin 26 130 - -
Vifa1g00789 131 PANTHER GLUTAREDOXIN 34 131 IPR011905 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00789 Vifa-Chr1 131144673 131145068 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00789 8 131 Miscellaneous Gene Families AT3G02000 53.957 5.19e-33 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00789 K03676 - gmx:100818015 170.629
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00789 1 131144673 131145068 Vifa1g00789 1 131144673 131145068 ECH