Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00780 ATGGCGCTAAGATTGAGCAACACTTTCTTTTCCGTTTCAGCTATAGCTTCAAATCATTATTCAAAGAAAACCCCTTTCAGATTCAAAATCACAACTGTTTCTGCTACAAATTCAATTCCAATGGCTTCCACCGAAACCCCAAATTCAACCTCAACTTCCAAAATCATCGATTCACATCTCCACGTCTGGGCTTCCCTTCAAGAGGCTAGTCAATTTCCTTATTCTCCTGGACAAGAGCCTAATTTACCAGGAAATGTTGATTTTTTGCTCCAGTGTATGGAGGAAGCAGGAGTAGATGGTGCACTCATTGTACAGCCAATTAATCATAAATTTGATCATACTTATGTCACAAGTGTTTTAAAGAAATATCCGAACAAATTTGTTGGCTGTTGTCTTGCCAATCCAGCTGGTGATGGAAGTGGGCTTAAGGAGTTTGAGCATCTTATCCTCAAGGATGGCTACCGTGCCGTTCGATTCAACCCTTATTTATGGCCATCTGGTGAAAAGATGACAAATGAAATAGGGAAGGCAATTTTCAAAAGAGCTGGCGAACTCAATGTACCAGTGGGCTTCATGTGTATGAAGGGGCTTGATCTGCATATTTCTGAAATTGAGGAACTATGCACAGAATTTCCATCAACAGGTGTATTGCTCGATCACTTGGCCTTTTGCAAACCACCATTAAATGATGAAGAAGGTCTTGTGTTTTCCAAGCTTTTAAATTTATCTAGATTCCCACAAGTATATGTGAAATTTAGTGCACTCTTCAGAGTATCAAGGACAAAATTTCCTTATCTGGATTTATCTCCTCTGTTGTCCAAAATTGTATCTAGCTTTGGGGCTAACCATGTAATATGGGGCAGTGATTTTCCGTTTGTTGTTCCTGAATGTGGCTACAAAGGAGCCAAAGAAGCAGTGCAACTCATTGGCAATGAAATATCTTTGGCTTCATCTGATTTAGAGTGGATCATGGGTAAGACTGCTGCACAACTTTTCCAAAGCCAACTGAATCCTTCTGGTTGA 1023 0.4008 MALRLSNTFFSVSAIASNHYSKKTPFRFKITTVSATNSIPMASTETPNSTSTSKIIDSHLHVWASLQEASQFPYSPGQEPNLPGNVDFLLQCMEEAGVDGALIVQPINHKFDHTYVTSVLKKYPNKFVGCCLANPAGDGSGLKEFEHLILKDGYRAVRFNPYLWPSGEKMTNEIGKAIFKRAGELNVPVGFMCMKGLDLHISEIEELCTEFPSTGVLLDHLAFCKPPLNDEEGLVFSKLLNLSRFPQVYVKFSALFRVSRTKFPYLDLSPLLSKIVSSFGANHVIWGSDFPFVVPECGYKGAKEAVQLIGNEISLASSDLEWIMGKTAAQLFQSQLNPSG 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00780 340 SUPERFAMILY Metallo-dependent hydrolases 54 332 IPR032466 -
Vifa1g00780 340 Pfam Amidohydrolase 56 332 IPR006680 GO:0016787
Vifa1g00780 340 Gene3D - 44 336 - -
Vifa1g00780 340 FunFam Catalytic/ hydrolase 44 334 - -
Vifa1g00780 340 PANTHER 2-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE 53 336 IPR032465 GO:0016831
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00780 - - pvu:PHAVU_008G016700g 517.694
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00780 1 129998501 130001307 Vifa1g00780 1 129998501 130001307 ECH