Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00773 ATGGGATGCCTATTGTCGACTCCCAAGGATACTGGTGGAAATAGAAGGAGACCGGGGAGTATTGGCGAGGTTTCGGTTTATGTTCCTGGTTTAAGGATTCCGAAGCCTGTTGATTTTGCTCAGTCGCTAGGTGATTATTTGTCGAAGAATATAATCGAGCGATTGTCTGCTCTTAGAACGCGGATAGTTGTAATGGCTAGCCAGGAAGGTCCTACGATTACAAGAACGAAAAGAAAAAGTGTTACTCAACATGGTGGTTCGACGCTGGCTGATCTTCTTCAGGCTCTTGAAGATTATTTGCCAGTTCTTCTAGGATTAGTTAAAGACGGAAGCCATTTACAATACAAAGTACAATTTGTTTGGATGAATCAAGAGGACGAAAAAGAGGAAACAGCCATGTCGAATGCTTGGTACGAGGTGTTGTCGGTTTTGCATTTGATGGCAATGCTATTGCACTCAAAGGCCAATTTGTTGCTGCTTCCAAGATCATCTAGTGATGGTCATCAGCAAAAAGTATCAGATGAAAACCGACGAACTTCTATTGATATCTTCTTGAAGGCTTCTGGATATCTGGATTGTGCAGTCAAACATGTCCTTCCACAGCTACCTGCAGAACTCAGGAGAAACTTACCGGTTGACTTAGCGGAAGGAGTTCTTCGAGCACTGTCTCTACAGGCATTAGGACAGGGTGTAGATATACAACTTGGAATGGCAATTGATAGTGCTAAAGCAACTCTTGCAGTGAAGCGTAGACTTGCGTGCGAGATGTTGAAATGTTGGCAACAGGCTCAGGATAACATTATGAACCTTCCGCTGGCAAATGGTTGGGGCGAAAAACATCACCTTCTTGTGAAATGGAAATATGTTGAAGCTAAGGCTGCAGCATATTATTACCACGGTTTGATTCTTGACGAGGGAAATACCGAGAAATCTCATGGGATGGCTGTAGCCGCTTTGCAAGCCGCAGATGAATACTTCAAAGAAAGCAAGAAGTTATGTGAGGCATTTAACACAGCTCCTCCATTGTCAAGAAATCCACCACTTTGGGGAACCATGAAATATCTCTCTGAAAAAATTCCTAAGGATACTTCAAGCAAGGTGCGAATAAACCGCGATCTATACACTCATGAAAGGATTATGGAAACAGCTCCAACATTGCCTGAATTTTCATTGGCATTGAAACCAGATGAGTATCAACCTCCACCAGTGGACTCTTCTTGGAGAACAGAGAACATAAAAGTGACACAAACTCATTCTAACCATGTCAATGGTGACAAATGA 1281 0.4278 MGCLLSTPKDTGGNRRRPGSIGEVSVYVPGLRIPKPVDFAQSLGDYLSKNIIERLSALRTRIVVMASQEGPTITRTKRKSVTQHGGSTLADLLQALEDYLPVLLGLVKDGSHLQYKVQFVWMNQEDEKEETAMSNAWYEVLSVLHLMAMLLHSKANLLLLPRSSSDGHQQKVSDENRRTSIDIFLKASGYLDCAVKHVLPQLPAELRRNLPVDLAEGVLRALSLQALGQGVDIQLGMAIDSAKATLAVKRRLACEMLKCWQQAQDNIMNLPLANGWGEKHHLLVKWKYVEAKAAAYYYHGLILDEGNTEKSHGMAVAALQAADEYFKESKKLCEAFNTAPPLSRNPPLWGTMKYLSEKIPKDTSSKVRINRDLYTHERIMETAPTLPEFSLALKPDEYQPPPVDSSWRTENIKVTQTHSNHVNGDK 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00773 426 CDD BRO1_Alix_like 23 400 - -
Vifa1g00773 426 SMART BRO1_2 25 417 IPR004328 -
Vifa1g00773 426 MobiDBLite consensus disorder prediction 404 426 - -
Vifa1g00773 426 Pfam BRO1-like domain 35 334 IPR004328 -
Vifa1g00773 426 Gene3D alix/aip1 like domains 33 415 IPR038499 -
Vifa1g00773 426 PANTHER UNCHARACTERIZED 1 415 IPR038898 -
Vifa1g00773 426 MobiDBLite consensus disorder prediction 393 426 - -
Vifa1g00773 426 ProSiteProfiles BRO1 domain profile. 25 426 IPR004328 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00773 Vifa-Chr1 128127461 128130343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00773 - - gmx:100820472 744.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00773 1 128127461 128130343 Vifa1g00773 1 128127461 128130343 ECH