Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00763 ATGTTCAATCAAGAGAAACTCATGCATTATCCTGGAGAACAACCATCATGGAGCTACTACATGAGGAGAGTAAGAAGAACAATGGAAGAAGATCAAATGGAGGGTATCATGAGATTAGCAACACAAAGTGCTGTTGTGATATTCAGCATTAGTAGTACTAGTTGTATGTGTCATGCCATGAAGAGTTTGTTTAGTGGAATGGGAGTGAATGCAATGGTTCATGAACTTGATCAAGATTCTAAACCATTCATGAGGTTACTTGGAAATTCAACATCTCTTCCTGTTGTTTTCATTGGTGGCAAATTAGTTGGTTCTATGGATAGGGTTTTGGCTTTTCATATCAATGGTTCTCTTGTTCCTCTTCTTAAAGATGCTGGTGCTTTGTGGCTCTAA 393 0.3817 MFNQEKLMHYPGEQPSWSYYMRRVRRTMEEDQMEGIMRLATQSAVVIFSISSTSCMCHAMKSLFSGMGVNAMVHELDQDSKPFMRLLGNSTSLPVVFIGGKLVGSMDRVLAFHINGSLVPLLKDAGALWL 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00763 130 PANTHER GLUTAREDOXIN 33 130 IPR011905 -
Vifa1g00763 130 NCBIfam glutaredoxin-like family 37 130 IPR011905 -
Vifa1g00763 130 Gene3D Glutaredoxin 17 129 - -
Vifa1g00763 130 SUPERFAMILY Thioredoxin-like 31 129 IPR036249 -
Vifa1g00763 130 CDD GRX_GRXh_1_2_like 44 121 - -
Vifa1g00763 130 ProSiteProfiles Glutaredoxin domain profile. 33 129 - -
Vifa1g00763 130 Pfam Glutaredoxin 45 103 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vifa1g00763 Vifa-Chr1 126985397 126985789 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vifa1g00763 36 130 Miscellaneous Gene Families AT3G02000 64.151 2.39e-33 112
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00763 K03676 - gmx:100818015 174.096
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00763 1 126985397 126985789 Vifa1g00763 1 126985397 126985789 ECH