Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vifa1g00571 ATGGGTGTCTCTTTCCTCTCAACCTCAACTCTTCCTTCTCTCCATCCACTACTTCGTTCTCATTATCCTAAAACAACTACAACCACACACCAACCTCGTTCAGTTTCCATTTGTTGTTCTAAAATCAAAACAGATGTTACTGATGAAGAACAACAGTTCCATTGGAAACGAAGAGACATTCTTAAATGCTTCGGGGTCACTATTGGTTTGGAATCGATAACAAACTCTGGATTGCTTGTTGGAACGGCTAATGCTGCTGACCTGATTGAACGCAGACAGCGTTCGGAGTTTCAATCTGAAATTAAAGGAACTCTTTATAAGGCCATTAAGGGAAATCCCGATATTGTTCCATCCATACTAACACTGGCGATAAATGATGCTTTGACTTATGATAAGGCAACGAAAACGGGTGGCCCAAATGGCTCTATACGGTTCAGCTCAGAAATAAGTAGACCTGAGAATAAGGGGCTTTCTGCAGCCTTGAATTTCATAGAGGAAGCAAAAAAAGAAATAGATTCATATTCGAAAGGTGGACCGATTTCCTATGCAGATCTAATCCAGTATGCAGCACAAAGTGCAACAAAGGCTACATTTTTAGCTTCTGCGATTCGCAAATGCGGTGGAAATGTGGAAAAAGGGAACTTGTTGTACACAGCATATGGATCAAACGGACAGTGGGGTTTGTTCGACCGACAATTTGGTAGGGCTGATACTCAAGAGCCGGATCCAGAGGGGAGAATTCCAATTTGGGAGAAAGCAAGTGTTCAGGAAATGAAAGATAAGTTTTCTGCTGTAGGCCTTGGTTCTCGCCAGCTTGCTGTTTTATCTGCATTCATAGGTCCGGACCAGGATGCAACAGAAGCCTTATTAGCATCTGATCCAGACGTTGCTCCATGGGTAACAAAATACCAACGGAGCCGCGAAACTGTCTCGCGAACCGATTATGAGGTTGATCTTATAACAACTTTCACAAAATTGAGTACCTTGGGCCAAAATATTAACTATGAAGCATACACGTATCCTCGTAAGAAGATCGACATTACTAAACTCAAGTTGTAA 1059 0.4212 MGVSFLSTSTLPSLHPLLRSHYPKTTTTTHQPRSVSICCSKIKTDVTDEEQQFHWKRRDILKCFGVTIGLESITNSGLLVGTANAADLIERRQRSEFQSEIKGTLYKAIKGNPDIVPSILTLAINDALTYDKATKTGGPNGSIRFSSEISRPENKGLSAALNFIEEAKKEIDSYSKGGPISYADLIQYAAQSATKATFLASAIRKCGGNVEKGNLLYTAYGSNGQWGLFDRQFGRADTQEPDPEGRIPIWEKASVQEMKDKFSAVGLGSRQLAVLSAFIGPDQDATEALLASDPDVAPWVTKYQRSRETVSRTDYEVDLITTFTKLSTLGQNINYEAYTYPRKKIDITKLKL 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vifa1g00571 352 Pfam Peroxidase 104 276 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vifa1g00571 352 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 52 342 IPR044831 GO:0004601|GO:0034599
Vifa1g00571 352 PRINTS Plant ascorbate peroxidase signature 116 131 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa1g00571 352 PRINTS Plant ascorbate peroxidase signature 134 144 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa1g00571 352 PRINTS Plant ascorbate peroxidase signature 148 172 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vifa1g00571 352 CDD plant_peroxidase_like 99 349 - -
Vifa1g00571 352 Gene3D - 85 267 - -
Vifa1g00571 352 Gene3D - 269 352 - -
Vifa1g00571 352 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 84 252 - -
Vifa1g00571 352 SUPERFAMILY Heme-dependent peroxidases 82 333 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vifa1g00571 352 ProSiteProfiles Plant heme peroxidase family profile. 101 280 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vifa1g00571 K00434 - gmx:100795192 550.821
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vifa1g00571 1 98329278 98331818 Vifa1g00571 1 98329278 98331818 ECH